Gene Information

Name : Runsl_3252 (Runsl_3252)
Accession : YP_004656760.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3794207 - 3794932 bp
Length : 726 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGAAAATCATTGAAACCTCCCACATTGCCAAACGCTACGTAATGGGTAGCGAAGTCATTGAAGCACTCAAAGACGTAAC
GATCTCAGTCAGTAAAGGGGAGTACGTGGCCTTCATGGGGCCTTCCGGCTCGGGCAAATCTACGCTGATGAACATCATTG
GCTGTCTGGATACGCCCACTTCGGGAAAGTATGTGCTCAACAACAAAGACGTGAGCGATATGAGCGAGAACGAGCTCGCT
GAGGTGCGCAACAAAGAGATCGGGTTTGTATTTCAGACCTTTAACCTCTTACCGCGCATGACCTCGCTGGAAAACGTGGC
TCTGCCCCTGATCTATGCGGGATACACCAAAGCCCAGCGGAGCGAAAAAGCCATGCTCGCCCTCAAAAGCGTAGGACTCG
AAAATCGGGCAGGTCACCGCCCTAATGAACTTTCGGGCGGACAACGTCAGCGGGTCGCTGTAGCCCGGGCGCTGGTCAAC
GACCCCAGTATCCTGCTGGCCGATGAGCCTACGGGAAACTTAGACAGCCGTACGTCGTACGAAATCATGGATCTGTTTGA
CCAACTGCACTCCAAGGGAAACACCATCGTGGTGGTCACCCACGAAGATGATATCGCCAAATATGCCCACCGCATCATTC
GCTTACGCGACGGTTTGGTCGAAACAGACATCATCAATACCAATCCAACGAAGGTAAATTTAGCCGTTCAGGGATTGGAA
AGCTAG

Protein sequence : 
MKIIETSHIAKRYVMGSEVIEALKDVTISVSKGEYVAFMGPSGSGKSTLMNIIGCLDTPTSGKYVLNNKDVSDMSENELA
EVRNKEIGFVFQTFNLLPRMTSLENVALPLIYAGYTKAQRSEKAMLALKSVGLENRAGHRPNELSGGQRQRVAVARALVN
DPSILLADEPTGNLDSRTSYEIMDLFDQLHSKGNTIVVVTHEDDIAKYAHRIIRLRDGLVETDIINTNPTKVNLAVQGLE
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Runsl_3252 YP_004656760.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 9e-57 54
Runsl_3252 YP_004656760.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 8e-53 50
Runsl_3252 YP_004656760.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 5e-45 46
Runsl_3252 YP_004656760.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 2e-41 45