Gene Information

Name : Runsl_3034 (Runsl_3034)
Accession : YP_004656551.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit A
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : -
Position : 3531233 - 3532987 bp
Length : 1755 bp
Strand : -
Note : PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: sli:Slin_

DNA sequence :
ATGTTACAGGAAATTCTCGGTATCGTTTTACTATTTGTCCTCACGGTTTTGTTAGCACTGCCATTGGGACGCTACATCGC
CAAGGTCTATTTAGGACAACCTACGTGGCTGGACTTTATGTCGCCACTTGAACACTTTATCTACAAAGTGTGTCGTATCA
ATCCTAAAAAGGAAATGACGTGGCAGGAACACTTGACAGCCCTTTTAACCATTAATTTTTTATGGTTTTTCTGGATGATG
TTCATTCTGATGAATCAGGGATGGCTTCCGCTCAACCCTGACGGGAATCCTTCCATGAGCCCTGATTTAGCCTTTAATAC
TGCTGTTTCCTTTTTGGTAAACTGTAATTTACAGCACTATTCCGGCGAAACGGGTGTGACGTATTTTTCGCAGTTGGCGG
GATTGATGTTTATGCAATTCGTGACCGCAGGAACGGGTATGGCCGCCGCGGCGATTGTGTTTAAGGCCATGAAACCCCAC
CCCAGCCCTCCCCTGAAGGGAGGGAGTTTTTATATAAGCCTCTCCCTCACAGGGGAGAGGTTTGGAGTGGGGTTAGGCAA
TTTTTACCACTATTTCCTCAAATCATGCACCCGTATTTTGTTGCCCATTTCGCTGATATCAGCCATCATTTTGGTCTTCA
ACGGTACACCCATGAACTGGGAAGGAAAAGCCAATATCGTTACGGTACAGGGAGATTCGGTACAGGTATCTCGCGGACCG
GCAGCGGCTCTGATCGCCATCAAACAGGCAGGAACCAACGGTGGGGGGTATTATGGTGTCAACTCAGCGCACCCGCTGGA
GAATCCCAACTACCTGACCAACATCGTCGAAAACATCCTTATCATTCTGATTCCCATTGCCTTTGTGTTTGCCTTGGGCT
TTTATCTGAATCGAAAAAAACTCGCCTGGATGATTTTTGGGGTCATGACTATTGGCTTTTTATTACTCTTGAGTGTCTCC
GTGTATTTTGAAATGCAGGGAAATCCCGCCCTTCATAAAATGGGTATCCGCCAAACACTTGGCAGTATGGAAGGAAAGGA
AATCCGCTTCGGTTCAGCGGCGTCGGCCTTCTGGGGTATCACGACCACAACCACTTCCAATGGCTCGGTCAACGCCATGC
ACGACAGTATGACGCCACTTTCGGGCGCCATGCAAATGATTGATATGATGATCAATGCGCTTTATGGGGGCGTAGGCGTT
GGTTTTCTGAACTTCTACGTTTTCATCATTATTTCCGTATTTATTTCGGGGCTGATGGTGGGAAGAACGCCCGAATTTTT
GGGCAAAAAGATTGAAGCCAAAGAGATGAAAATTGCCACGATTATCGCGTTGCTGCACACATTTTTGATTCTGGCGTTTA
CGGCGCTTTCAAGTTATGTATTTACCCAAGACCCAAGCATTGGCTGGCTTAACAACCCCGGCTTTCATGGCTTTTCAGAA
ATGTTGTATGAATATACCTCCTCATCCGCCAACAACGGTTCAGGTTTTGAAGGCTTAGGCGACAACAATCCTTTTTGGAA
CATTACCTGCGGTATTGTGCTGATTCTGAGCCGTTATCTGCCTATTATCGGGCCGGTGGCGATCGCGGGTATTTTGGCAA
ATAAGAAGTACATCCCCGAATCGGCGGGAACGCTTCAAACTGACACGGCTACGTTTGGCTTTATGGTATTTGCCGTGATT
TTTATCATCGCCGCGCTGTCTTTTTTCCCCGCATTGGCGCTGGGGCCGTTGGCGGAGTTTTTTACGTTGCGCTGA

Protein sequence :
MLQEILGIVLLFVLTVLLALPLGRYIAKVYLGQPTWLDFMSPLEHFIYKVCRINPKKEMTWQEHLTALLTINFLWFFWMM
FILMNQGWLPLNPDGNPSMSPDLAFNTAVSFLVNCNLQHYSGETGVTYFSQLAGLMFMQFVTAGTGMAAAAIVFKAMKPH
PSPPLKGGSFYISLSLTGERFGVGLGNFYHYFLKSCTRILLPISLISAIILVFNGTPMNWEGKANIVTVQGDSVQVSRGP
AAALIAIKQAGTNGGGYYGVNSAHPLENPNYLTNIVENILIILIPIAFVFALGFYLNRKKLAWMIFGVMTIGFLLLLSVS
VYFEMQGNPALHKMGIRQTLGSMEGKEIRFGSAASAFWGITTTTTSNGSVNAMHDSMTPLSGAMQMIDMMINALYGGVGV
GFLNFYVFIIISVFISGLMVGRTPEFLGKKIEAKEMKIATIIALLHTFLILAFTALSSYVFTQDPSIGWLNNPGFHGFSE
MLYEYTSSSANNGSGFEGLGDNNPFWNITCGIVLILSRYLPIIGPVAIAGILANKKYIPESAGTLQTDTATFGFMVFAVI
FIIAALSFFPALALGPLAEFFTLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 8e-69 41
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 6e-69 41
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 8e-69 41
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 8e-69 41
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 8e-69 41
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 1e-69 41