Gene Information

Name : Runsl_3031 (Runsl_3031)
Accession : YP_004656548.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 3528501 - 3530555 bp
Length : 2055 bp
Strand : -
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; KEGG: sli:Slin_6261 hypothetical protein; SPTR: uncharacterized protein

DNA sequence :
ATGAAACGTTCTCAATCCGCCTCTCTCTTTCAGGGAGGTATGGCAAAAACCGCTCTGTTCGAGTCGTTTGTCAAATTAAA
TCCTGCGGTGATGTACCGTAACCCCGTTATGTTTACGGTCGAGATCGGAACAGTGGTGATGTTGATTGTGTGCCTCCAAA
TTGCTTTTGACGGCGACACTACCCAAGGGAGTTTAGCCTACAACATCGTGATTTTCTCAGTGCTGTTTCTGACTTTACTA
TTTGCCAACTTTGCCGAAGCATTAGCCGAAGCACGCGGCAAAGCCCAAGCTGACAGCCTTCGAAAAACTCGCGAAGAAAC
CCCCGCCAAAGTCATTCGAACACTCGGTCGCCTGAAAGTCAACGAGCTTCAAATCATTCCTTCTTCCCAACTTGAAAAAG
GCGACATATTTGTCTGCGAAGCAGGAGATATTATTCCCACCGACGGCGAAATCATCGAAGGCTTAGCGACCATTGACGAG
TCGGCCATCACGGGAGAATCTGCGCCCGTGATTCGCGAAGCAGGCGGGGATAAATCGTCGGTAACGGGTGGAACTAAAGT
GCTTTCCGATCATATTAAAGTCAAAGTAACGACCCAACCCGGCGAGAGTTTTCTGGATAAAATGATTGCCTTGGTGGAAG
GTGCTTCGCGTCAGAAAACACCGAATGAAATCGCTTTAACGATTTTACTGGCAGGCTTTACCCTCATCTTCGTCATCGTC
TGCGTCACACTCAAACCGTTTGCTGATTATGCCAACACTCCCATTGCCATTTCGGCTTTCATTTCGCTTTTTGTCTGTTT
GATTCCAACGACCATTGGCGGATTGCTTTCTGCCATCGGGATTGCGGGAATGGACCGAGCCTTACGGGCCAACGTGATTA
CCAAATCCGGAAAAGCCGTTGAAACAGCCGGCGATATTGATACCCTGCTTTTGGACAAAACCGGAACCATCACCATCGGC
AACCGCAAAGCCACCCATTTTTGGCCCACAGACGGAGTGAGTGATGAACGATTTATTACATCAGCGCTGTATTCGTCGTT
GGCCGATGAAACTCCCGAAGGAAAATCAATTCTTGAGTTGGGGCAGCAAAAAGGGCAAAAACTACCTGTTATGCCCGAAC
GCGCCGAAATGATACAATTCACCGCCGAAACTCGTTCCTCAGGAGTCAATTTCCCCAATAATGCCCGTATTCGGAAAGGA
GCGCAGGATTCTATTCGGGTAATGGTCGAAAGAGCAGGCAATGAATTTCCGAAGGATACCAGCGAAAGAGTGCGCGAAAT
TGCCACGAATGGCGGAACTCCATTAGTAGTTTCCGAAAACGACAACGTACTGGGAGTCATTGAATTACAGGACGTGATCA
AACCCGGCATTCAGGAACGTTTTGAACGCCTGCGTAAAATGGGCGTCAAAACGGTGATGGTCACGGGCGATAATCCGCTT
ACTGCGAAATACATTGCCAACGTAGCGGGAGTAGATGATTTTATTGCCGAAGCCAAGCCCGAAGACAAAATGAACTACAT
CAAAGCCGAGCAGGCCAACGGCAAACTCGTCGCCATGATGGGCGACGGCACCAACGATGCGCCCGCCTTAGCCCAAGCCG
ATGTAGGCGTGGCCATGAACAGTGGAACACAGGCTGCCAAAGAAGCGGGCAACATGGTGGATTTGGACAATGACCCGACC
AAACTCATTGAAATCGTGGAAATTGGTAAGCAGTTGTTGATGACGCGCGGTACACTCACTACCTTCTCCATTGCCAACGA
CGTCGCCAAGTACTTCGCCATCGTCCCCGCCTTGTTTATGACTTCCATCCCTGCCTTGCAATCACTCAATATTATGCGTT
TAACCAGTCCTGAAAGTGCGATTTTATCGGCCGTGATTTTTAACGCGATCATCATCCCGATGTTGATTCCGCTGGCACTG
AAAGGCGTGGCTTACAAGCCCATTGGGGCAAGTGCCCTGTTGCGCCGCAACCTGTTGATTTATGGCTTGGGCGGTCTGAT
TGTGCCTTTTATCGGCATCAAACTCATTGATTTGGTAGTGGGAAGCCTGTTTTAA

Protein sequence :
MKRSQSASLFQGGMAKTALFESFVKLNPAVMYRNPVMFTVEIGTVVMLIVCLQIAFDGDTTQGSLAYNIVIFSVLFLTLL
FANFAEALAEARGKAQADSLRKTREETPAKVIRTLGRLKVNELQIIPSSQLEKGDIFVCEAGDIIPTDGEIIEGLATIDE
SAITGESAPVIREAGGDKSSVTGGTKVLSDHIKVKVTTQPGESFLDKMIALVEGASRQKTPNEIALTILLAGFTLIFVIV
CVTLKPFADYANTPIAISAFISLFVCLIPTTIGGLLSAIGIAGMDRALRANVITKSGKAVETAGDIDTLLLDKTGTITIG
NRKATHFWPTDGVSDERFITSALYSSLADETPEGKSILELGQQKGQKLPVMPERAEMIQFTAETRSSGVNFPNNARIRKG
AQDSIRVMVERAGNEFPKDTSERVREIATNGGTPLVVSENDNVLGVIELQDVIKPGIQERFERLRKMGVKTVMVTGDNPL
TAKYIANVAGVDDFIAEAKPEDKMNYIKAEQANGKLVAMMGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDNDPT
KLIEIVEIGKQLLMTRGTLTTFSIANDVAKYFAIVPALFMTSIPALQSLNIMRLTSPESAILSAVIFNAIIIPMLIPLAL
KGVAYKPIGASALLRRNLLIYGLGGLIVPFIGIKLIDLVVGSLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 1e-140 57
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-140 57
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-140 57
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-140 57
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-140 57
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 7e-142 57
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 4e-144 56
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 3e-144 56