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Name : Runsl_2951 (Runsl_2951) Accession : YP_004656471.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 3426256 - 3427584 bp Length : 1329 bp Strand : - Note : PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: dfe:Dfer_3986 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; SPTR: Di DNA sequence : ATGTCCCTAACACTCGGAAATACCGAATATTTCAAAGGCATCTCCAAAATTCAGTTTGAAGGTCGTGAATCTGACAACCC GCTGGCCTTCAAGTGGTACGACGAAAACCGTCTCGTTGGCGGAAAGACCATGAAAGAGCATTTGCGTTTTGCCGTTGCTT ATTGGCATACCTTCTGCGGCACAGGTGCCGATCCTTTCGGACCGGGCACGAAAGTATTTGCGTGGGATTTACACGATGAC GCGGTACAGCGAGCCAAAGACAAAATGGACGCCGCTTTTGAATTCATCACTAAGCTGGGCGTTCCTTATTACTGTTTTCA CGATCTTGACTTAGTGGATGAAGGCCCAACCATCAGCGAATACGAGCGCCGTATGCAGGCCATTGTAGACTATGCCAAAG GTAAACAGGCCGAAAGTGGTGTAAAATTATTATGGGGTACAGCCAACGTATTCTCAAACCCGCGTTACATGAACGGTGCC TCTACCAACCCTGATTTTAACGTAGTAGCTCATGCAGGCGTGCAGGTAAAAACTGCCATTGATGCCACGATCGCCTTAGG CGGTGAAAATTACGTATTTTGGGGAGGACGTGAAGGCTACATGACCTTGCTGAATACCAATATGAAGCGCGAACTTGACC ACCTTGGACAATTCCTGACCATAGCACGTGATTATGCCCGTAAGAATGGTTTTAAGGGAACGTTCTTTATTGAGCCCAAG CCTTGCGAGCCTACCAAACACCAATATGATTATGACTCTGCGACCGTGATCGGCTTCCTGCGTGAATATGGCCTGGACAA AGACTTCCAGTTAAATATTGAAGTAAACCACGCGACATTGGCCGGACACACGTTCCAGCACGAGCTACAGGTAGCCGCCG ATGCCGGTATGCTGGGCAGCATCGACGCCAACCGCGGTGACTATCAAAACGGCTGGGATACCGATCAGTTCCCGATCAAT TTAAGTGAGTTGACCGAGGCCATGCTGGTTATTCTTGAAGCAGGCGGCATCAAAGCCGGAGGGATCAACTTCGACGCCAA AACCCGTCGTAACTCCACCGATCTTGAAGATATTTTCATTGCGCACATCGGTGGAATGGATGCCTTTGCCCGTGCACTCG TGATCTCTAATGATATTCTGGAAAAATCATCCTACAAAAAACTTCGTACCGAGCGTTACGCTTCGTTCAACAGCGGTGCC GGCAAGAAATTTGAAGAAGGTGAGTTGACGTTGGAAGATCTGCACAGCTTCGCCATTGCGGCCGGTGCGCCGAAACAGAT CAGCGGCAAGCAGGAGCTGTTTGAAAATATCCTGAATCAGTATATTTAA Protein sequence : MSLTLGNTEYFKGISKIQFEGRESDNPLAFKWYDENRLVGGKTMKEHLRFAVAYWHTFCGTGADPFGPGTKVFAWDLHDD AVQRAKDKMDAAFEFITKLGVPYYCFHDLDLVDEGPTISEYERRMQAIVDYAKGKQAESGVKLLWGTANVFSNPRYMNGA STNPDFNVVAHAGVQVKTAIDATIALGGENYVFWGGREGYMTLLNTNMKRELDHLGQFLTIARDYARKNGFKGTFFIEPK PCEPTKHQYDYDSATVIGFLREYGLDKDFQLNIEVNHATLAGHTFQHELQVAADAGMLGSIDANRGDYQNGWDTDQFPIN LSELTEAMLVILEAGGIKAGGINFDAKTRRNSTDLEDIFIAHIGGMDAFARALVISNDILEKSSYKKLRTERYASFNSGA GKKFEEGELTLEDLHSFAIAAGAPKQISGKQELFENILNQYI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 2e-104 | 52 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 1e-104 | 52 |
