Gene Information

Name : Runsl_2882 (Runsl_2882)
Accession : YP_004656402.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Unknown
Product : transposase IS4 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3354888 - 3355904 bp
Length : 1017 bp
Strand : +
Note : PFAM: Transposase DDE domain; KEGG: sli:Slin_0249 hypothetical protein; SPTR: uncharacterized protein

DNA sequence :
ATGCCAAAAATACACTTTTTTACCCAAGCCGAAAATTTACCGCCCAAGGCACAAAGAAATCCACCAATCCCCAAAGAAAA
ATACCGGTTAACCAACTGGCCTGAATATAATAAGGCATTGATTAACAGAGGCTTTGTCACCCTTTGGCTGAATGAAAAGA
CGTTGACTCAATGGTACTATCAAGGACCTCGTACTCGCGGCGGGCTATTGCGCTATTCAGATCAATGTATCCAAGCAGCC
TTGGCTCTTAAAGCGGCCTTCCGGCTGGCCTTTCGACAAACACAAGGGTTGATTCAGAGTTTATTAGCGATTATGAAGAT
TGACATTCAAGTACCCAGCTACAGTCAGCTTTGTAGGCGACAGGCTCACCTACAGGCCTTCCATACCCCTCAAAAACCTA
CTGATAACCAAGTCAAACCGATTCATCTGGTAGTGGATAGTACGGGATTAAAAGTCTATGGCGAGGGTGAGTGGAAGGTA
CGCAAGCATGGAGCTGATCAACGGCGTACCTGGCGTAAACTGCATTTAGTAGCCGATGAAGCTACTAATACCATCCACGC
TGTTGAGTTGACAACTCATTCCATCAGTGATGCTGAGATGATTAAGCCCTTACTGGCTGATATTGAATGGCCTATCGCTA
AACTAAGGGCAGATGGAGCTTATGACCAAGTCAAAGTTTTTGACGAGTTAGAAAAGCACTGGATTCAGCCTGTGATACCG
CCCCGATCCAACGCAGTCATCTGGACCAGTGAAAACGGAAATGATTTAATACACCCTCGTAATGAGGCCGTTCGTCAGAT
TCGTTTGGTGGGTATAGCAGCATGGAAACAGCAAATTGGCTACCATCGCCGGAGCAAAGCCGAGACGGCTATGTTTCGTT
GGAAGATGATTTTCGGTGAACGGTTGTCGGCTCGATTGGTAACTAATCAACAGACCGAAGCCCAAATCAAAGCCACTTGC
TTAAACCGATTCACCAGATTGGGTATGCCTAAGACAGTCAAACGGTTGCCAACATAA

Protein sequence :
MPKIHFFTQAENLPPKAQRNPPIPKEKYRLTNWPEYNKALINRGFVTLWLNEKTLTQWYYQGPRTRGGLLRYSDQCIQAA
LALKAAFRLAFRQTQGLIQSLLAIMKIDIQVPSYSQLCRRQAHLQAFHTPQKPTDNQVKPIHLVVDSTGLKVYGEGEWKV
RKHGADQRRTWRKLHLVADEATNTIHAVELTTHSISDAEMIKPLLADIEWPIAKLRADGAYDQVKVFDELEKHWIQPVIP
PRSNAVIWTSENGNDLIHPRNEAVRQIRLVGIAAWKQQIGYHRRSKAETAMFRWKMIFGERLSARLVTNQQTEAQIKATC
LNRFTRLGMPKTVKRLPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAG31792.1 unknown Not tested VPI Protein 3e-44 41