Gene Information

Name : Runsl_0231 (Runsl_0231)
Accession : YP_004653818.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Unknown
Product : ATP-dependent protease hslV
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG5405
EC number : -
Position : 289392 - 289940 bp
Length : 549 bp
Strand : +
Note : PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; COGs: COG0193 Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; InterPro IPR001328; KEGG: dfe:Dfer_2675 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; PRIA

DNA sequence :
ATGAGTATTCCAACCATACATGCCACGACCGTCGTAGGCATTATTCATAACGGAGAAGTAGTGGTGGGAGCCGACGGGCA
AGCCACCATGGGAAATACCGTTGCCAAAAGCAACGTTCGGAAAGTAAGAAGTTTGGCCGGCGGAAAAGTAATCGCCGGTT
TTGCGGGCTCTACCGCCGATGCCTTCACGCTCATTGAGCGCTTTGAAGAAAAACTCAATGCCTACGGCGGAAACCTCAAA
CGGGCCGCCATCGAGCTCGCCAAAGACTGGCGCACCGACCGCTACCTTCGCAAACTGGAAGCGATGATGATCGTAGCGGG
CAAAAATGAACTGCTTGTCATTTCGGGCACGGGCGATGTGCTTGAACCCGACAATCAGGTAGCTGCTATCGGCTCAGGTG
CCATGTATGCACAGAGTGCGGCATTGGCCCTGAAAAAACACGCGCAAAATCTCTCGGCCGAAGAAATGGTACGCGAAAGC
CTCCATATTGCGGCCGATATCTGCATTTATACCAATCATAATCTGGTCGTAGAAAAGGTCAAAGAGTAG

Protein sequence :
MSIPTIHATTVVGIIHNGEVVVGADGQATMGNTVAKSNVRKVRSLAGGKVIAGFAGSTADAFTLIERFEEKLNAYGGNLK
RAAIELAKDWRTDRYLRKLEAMMIVAGKNELLVISGTGDVLEPDNQVAAIGSGAMYAQSAALALKKHAQNLSAEEMVRES
LHIAADICIYTNHNLVVEKVKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslV YP_003728752.1 protein HslV Not tested cag PAI Protein 5e-34 53