Gene Information

Name : Runsl_2191 (Runsl_2191)
Accession : YP_004655735.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2522193 - 2522393 bp
Length : 201 bp
Strand : -
Note : PFAM: Helix-turn-helix; KEGG: sli:Slin_0312 hypothetical protein; SPTR: uncharacterized protein

DNA sequence :
ATGAAAAATACGATTCACGTTGAGCGTGCCATCCGACGCATCACTCAGGCCGATCTGGCCGCTGCGGTGGGGGTATCCCG
CCAAACCATCAATGCCCTCGAAGCGGCTAAATACGTCCCTTCGGTCGTATTGGCGATGAAGATCGCCAACTATTTTGAAA
AGCCCGTGGAAGCCATTTTTGAATTGGGGGAGGAAGATTAA

Protein sequence :
MKNTIHVERAIRRITQADLAAAVGVSRQTINALEAAKYVPSVVLAMKIANYFEKPVEAIFELGEED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 5e-10 48
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-10 48
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-08 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Runsl_2191 YP_004655735.1 XRE family transcriptional regulator VFG2168 Protein 1e-10 48
Runsl_2191 YP_004655735.1 XRE family transcriptional regulator VFG2175 Protein 1e-10 48