Gene Information

Name : Runsl_1815 (Runsl_1815)
Accession : YP_004655371.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 2058563 - 2059117 bp
Length : 555 bp
Strand : +
Note : PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; COGs: COG0080 Ribosomal protein L11; InterPro IPR020784:IPR020783:IPR000911:IPR006519; KEGG: dfe:Dfer_3453 50S ribosomal protein L11; P

DNA sequence : 
ATGAGCAATCTGAATTGGTATGTTATCCGGGCAGTGTCTGGTCAGGAAAAAAAGATTAAGACCTATCTCGAAAACGAAAT
TACCAGACAAGGCATTCAAGAATCCATTCCGGAAATTTTGATTCCTACCGAGAAAATTGTAGAAATGCGTAACGGTAAAA
AACGGATCCGTGAGAAAAATTTTTTCCCGGGGTATATCATCATTTCTGCTGATTTGACTAAGGGTGATGCCTATCACTTG
ATTACCACCATGCCGGGGGTTTTAGGTTTCTTAGGAAATACGACCGGAAACTCTAAAGTGCCGGTACCTTTGCGTCAGGC
AGAAATCAATCGAATTTTAGGCAAAGTGGAAGACGCGGTCGAAGAAGTTGAAACACCGAAAGTTAGTTTCATGAAGGGTG
AAAGCGTCAAAATCATTGACGGTCCTTTCAGTGGATTTATCGGTACGGTAGAAGAAATTTTTGACGACAGGAAGAAGCTA
AATGTCGTGGTAAAAATATTCGGGCGCAGTACGCCCGTGGAGCTGAGTTACGCACAAGTCGAAAAAGAAAGCTGA

Protein sequence : 
MSNLNWYVIRAVSGQEKKIKTYLENEITRQGIQESIPEILIPTEKIVEMRNGKKRIREKNFFPGYIIISADLTKGDAYHL
ITTMPGVLGFLGNTTGNSKVPVPLRQAEINRILGKVEDAVEEVETPKVSFMKGESVKIIDGPFSGFIGTVEEIFDDRKKL
NVVVKIFGRSTPVELSYAQVEKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 1e-33 42
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 1e-33 42