|
Name : Runsl_1813 (Runsl_1813) Accession : YP_004655369.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Resistance Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 2056965 - 2058173 bp Length : 1209 bp Strand : + Note : PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein DNA sequence : ATGGCCGCAAAACGTAATTCTGCACTTACCTTTATCTTCATAACTCTACTCATCGACATCACCGGCATCGGAATTATTGT CCCTGTCGTACCGAGGCTTATCCAGGAATTAACGGGCGAAGGTCTCTCTAAAGCTGCGCTTTACGGAGGTTGGCTGACGT TCATTTACTCTGTTATGCAATTTGTCTTTTCTCCAATTTTAGGAGGATTGAGCGATCAATATGGCCGTCGTCCCGTCTTA TTGGGTTCTTTGTTCGGCTTTGGCGTAGATTATATATTTTGTGCGTTTACTTCTACGATAGGGTGGCTCTTTTTAGCAAG AGTAATAGCCGGTATTTTGGGAGCAAGTTTTTCAACGGCCGGCGCGTACATTGCCGATGTAAGCCCTCCGGAAAAACGTG CTCAAAATTTCGGTTTGATTGGTGCGGCATTCGGATTGGGCTTTATTCTTGGACCAATGATAGGAGGATTGTTGGGCCAG TACGGGCCGCGTGTCCCTTTTTTGGTGTCTGCCGGATTGAGTTTGCTCAATTGCCTTTACGGTTATTTTGTATTGCCCGA ATCGCTCGAACCTAAAAATCGACGCCCCTTTGACTGGAAGCGAGCCAATCCTGTCGGCTCATTACGTCATTTACAGCGAT ACCCCGTTATTTTTGGACTCATCATTCCATTGATTCTGATCTATATTGCCGGCTATTCTACGCAAAGTACGTGGACCTAT TTTACCATGGAAAAATTTGGATGGGACGAAAAATGGGTCGGTTATTCTTTAGCCTTTGTCGGACTGATGGCGGCACTGGT ACAGGGAGGGCTAACGCGCACCATTATTCCGAAGTTAGGAAATATCAAATCCATCTATTGGGGACTTGCCTGCTATGGCG TCAGCTTTCTGTTATATGCTTTTGCCAATAAAGGCTGGATGATGTTTGCCATTACCGTTATGTCGGCATTGGGAGGGATT GCCACGCCGGCGTTGCAGGCAATCATGTCAAATGAAGTGCCTCCCAACGAGCAGGGCGAACTTCGGGGAGCGCTTACCGG CCTGATGAGCCTGACGGCCATTTTGGGCCCCGTTATGATGACCGCTCTTTTTGCCTATTTCACCTCCCCTTCAGCGCCTT TTCAGTTTGCGGGAGCGCCTTTTATGATGGCCGCTGTTCTAATCCTTTTCAGTTTCATTTCTGTAAAGAAAATATTGACC AAAAGCTGA Protein sequence : MAAKRNSALTFIFITLLIDITGIGIIVPVVPRLIQELTGEGLSKAALYGGWLTFIYSVMQFVFSPILGGLSDQYGRRPVL LGSLFGFGVDYIFCAFTSTIGWLFLARVIAGILGASFSTAGAYIADVSPPEKRAQNFGLIGAAFGLGFILGPMIGGLLGQ YGPRVPFLVSAGLSLLNCLYGYFVLPESLEPKNRRPFDWKRANPVGSLRHLQRYPVIFGLIIPLILIYIAGYSTQSTWTY FTMEKFGWDEKWVGYSLAFVGLMAALVQGGLTRTIIPKLGNIKSIYWGLACYGVSFLLYAFANKGWMMFAITVMSALGGI ATPALQAIMSNEVPPNEQGELRGALTGLMSLTAILGPVMMTALFAYFTSPSAPFQFAGAPFMMAAVLILFSFISVKKILT KS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 4e-45 | 42 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 3e-45 | 42 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 3e-45 | 42 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 3e-45 | 42 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 3e-45 | 42 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 2e-45 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Runsl_1813 | YP_004655369.1 | major facilitator superfamily protein | NC_011586.7045189.p0 | Protein | 3e-45 | 42 |
| Runsl_1813 | YP_004655369.1 | major facilitator superfamily protein | AY264780.2.gene3.p01 | Protein | 7e-46 | 42 |
| Runsl_1813 | YP_004655369.1 | major facilitator superfamily protein | AF090987.gene.p01 | Protein | 2e-42 | 42 |
| Runsl_1813 | YP_004655369.1 | major facilitator superfamily protein | AF534183.gene.p01 | Protein | 1e-45 | 42 |
| Runsl_1813 | YP_004655369.1 | major facilitator superfamily protein | NC_010410.6002597.p0 | Protein | 1e-45 | 42 |
| Runsl_1813 | YP_004655369.1 | major facilitator superfamily protein | CP001485.1.gene2821. | Protein | 1e-45 | 42 |
| Runsl_1813 | YP_004655369.1 | major facilitator superfamily protein | Y19114.gene.p01 | Protein | 1e-44 | 41 |
| Runsl_1813 | YP_004655369.1 | major facilitator superfamily protein | X75761.gene.p01 | Protein | 8e-45 | 41 |
