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Name : Runsl_1606 (Runsl_1606) Accession : YP_004655163.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1829330 - 1831084 bp Length : 1755 bp Strand : + Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001 DNA sequence : ATGACCAAAGCGGTAATTCACTGCCGCAAACTGCTGAATACAATGCTAAGCGAACAAGAACTATTGCGCCGCCAAAAGCG CGAAGAATTGATGAAACTGGGGATTGATCCCTACCCTGCCGAATCGTTTGAGGTAAACGTCACCTCGGCCGACATCCATA AAAACTACGAGAATAATAAGCTTGACTATAAGAATATCTCCATTGCCGGCCGTTTGATGAGCTTCCGCATCATGGGAAGC GCCTCTTTTGTGGAGCTTCAGGACAGCACCGGACGTATTCAGCTGTACTTCCGTCGCGATGATCTTTGCCCGGACGAAGA TAAAACCCTGTACAACACAATCTTCAAAAAACTCCTCGACATCGGTGATATCATCGGCGTGAAAGGATTTGTGTTTACGA CCCAAACCAACGAGGTCTCCATTCACGTACAGGAATTTAAAATTCTGAACAAGTCATTGAAACCGCTGCCGGTGGTCAAA GAGGCCGACGGAAAAACCTACGACGGCTTCACCGACCCCGAGCAACGCTACCGTCAGCGGTACGTGGACCTGATCGTGAA TCCGCACGTGAAAGATATTTTCATCAAACGCGCCAAGATCATCAGTACCATGCGGCGCATATTTGATGATAAAGGTTGGT TGGAAGTAGAAACTCCTATTTTGCAGCCTATCCACGGCGGTGCCACGGCTCGTCCGTTCAAAACCCACCACAATACCTTG GATATGCCGCTGTACATGCGCATTGCCAACGAATTGTACCTCAAACGTCTCATCGTGGGCGGTTTTGACGGGGTGTATGA ATTCGGAAAAATGTTCCGCAACGAAGGCATGGACCGCACGCACAACCCCGAGTTTACGTCGCTGGAATTTTACGTGGCCT ACAAAGACTACCACTGGATGATGAGTATGACCGAAGAACTGCTGGAAAAAGTAGCCTTAGCGGTAAACGGTCAAACTAAA GTGCAGTCGTGGGGCAATGAAATTGAGTTTGCCGGCCCGTACGAGCGATTGAGCATTTTTGAAGCCATTGAAAAATACAC GGGCGTCAACGTCGAAGGAAAAACGGAAGCGGAATTGATTGCGCATTGTACCGAATGGGGCATCGAAACCGACGGAACCA TGGGCGTGGCTAAATTGATTGATGAGATCTTCGGGGCCAAAGTGGAAGACAACCTGATTCAACCGACATTCATCATTGAT TATCCCGTCGAAATGTCGCCGTTGACCAAAAAGCACCGCAGCAAACCGGGACTGGTGGAGCGTTTTGAGTTATTTATCAA CGGAAAAGAGGTCGCCAACGCCTATTCGGAGTTGAATGACCCCATCGACCAACGCGAGCGTTTTGAGGAGCAGCTCCGCC TGGCCGAGCGCGGCGACGAAGAAGCGATGGCAATGGACGAAGATTTCATCCGATCACTGGAATATGGAATGCCGACCACG TCAGGAATCGGTATAGGCATCGACCGCCTCACCATGATGCTGACCGATCAGACGAGCATTCAGGAAGTGCTGTTCTTCCC GCAGATGCGCCTCGAAAAGAAAGTGGAAATGGCTTCCGAAAATGATTACATGGCGCAGGGGGTGCCCACTATTTGGATTC CGGCCTTGCAGAAAATGGGCTTTTTGACCATCGAAGCCCTCAAAGCGGCCAATCCCAACAAAATCTTCAACGATCTGGGC GGCCTGCGCAAAAAGTTAAAAATCGAAGCTCCCATGCCGAAGAAAGAGGAAGTGGAGAGTTGGATAAACGGATAA Protein sequence : MTKAVIHCRKLLNTMLSEQELLRRQKREELMKLGIDPYPAESFEVNVTSADIHKNYENNKLDYKNISIAGRLMSFRIMGS ASFVELQDSTGRIQLYFRRDDLCPDEDKTLYNTIFKKLLDIGDIIGVKGFVFTTQTNEVSIHVQEFKILNKSLKPLPVVK EADGKTYDGFTDPEQRYRQRYVDLIVNPHVKDIFIKRAKIISTMRRIFDDKGWLEVETPILQPIHGGATARPFKTHHNTL DMPLYMRIANELYLKRLIVGGFDGVYEFGKMFRNEGMDRTHNPEFTSLEFYVAYKDYHWMMSMTEELLEKVALAVNGQTK VQSWGNEIEFAGPYERLSIFEAIEKYTGVNVEGKTEAELIAHCTEWGIETDGTMGVAKLIDEIFGAKVEDNLIQPTFIID YPVEMSPLTKKHRSKPGLVERFELFINGKEVANAYSELNDPIDQRERFEEQLRLAERGDEEAMAMDEDFIRSLEYGMPTT SGIGIGIDRLTMMLTDQTSIQEVLFFPQMRLEKKVEMASENDYMAQGVPTIWIPALQKMGFLTIEALKAANPNKIFNDLG GLRKKLKIEAPMPKKEEVESWING |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-98 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Runsl_1606 | YP_004655163.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-98 | 45 |
