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Name : Runsl_1557 (Runsl_1557) Accession : YP_004655114.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1770091 - 1772718 bp Length : 2628 bp Strand : + Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; InterPro IPR008538; KEGG: sli:Slin_4968 hypotheti DNA sequence : ATGAATTTCAACCAATATACCATCAAAGCGCAGGAGGTCATCCAGCGTGCGGTGCAGATCGCTCAGAGCAACCAACAACA AGCGGTAGAAACGGGACACGTTTTGCAGGCCATTTTGGAAGATGACCCCAACACTTCGCAGTTTTTGATGAAAAAACTGA ATGTGCAGCCTCAAGTACTGCAAACCAGGATACAGGCCACCGTCAATGCCTATCCAAAAGTAGCAGGTACGGCCGCCACC GAATACATAAGTAATGATTTAAACAGTGCTTTTCAAAAAGCCCAAACGTACCTGAAGGAATTTCAGGATGAATTTGTCAG CGTCGAAATGCTGTTTCTTGGCTTGGCCACGGGCAAAGATGCCACCGCCCGACTCATGCAGGAAGCAGGTTTTAAAGAAA AAGAATTACTGGCCGCCATTAAAGAATTAAGAGGAAAAAATAACCCCGTGAAAGATCAAAATGCCGAAGCAAAGTACCGT TCACTCGAACGCTACAGCAAAAATTTGAATGAAATGGCCCGGGCGGGAAAAATTGACCCCGTCATCGGTCGCGACGACGA AATTCGCCGGGTATTGCAGATCTTGGCCCGCCGTACCAAAAACAACCCCATGCTGCTCGGTGAGCCGGGGGTGGGAAAAA CAGCCATTGTGGAAGGCCTTGCCCAACGTATCGTGCAAGGCGACGTACCCGAACAACTGAAAACTAAAGAGATCGTATCG CTCGACATGGGCCTGCTCATTGCCGGGGCCAAGTACAAGGGGGAATTTGAAGAACGTCTGAAGGCAGTAATCAAAGAGGT CACCGATTCTGACGGACAGGTCATTTTGTTCATTGATGAAATCCATACGCTCATCGGGGCGGGGGCCGGTGGTGAGGGCG CCATGGATGCTGCCAACTTGCTCAAACCGGCCCTCGCGCGGGGCGAACTCCACACCATTGGGGCCACCACCACCAAGGAG TACCAAAAATACATTGAGAAAGACAAAGCGCTTGAACGCCGCTTTCAGGTCGTCACCGTCGATGAGCCCAACGAACTGGA TGCCATCAGCATCCTGCGCGGTATCAAAGATAAGTACGAACTTCACCACGGAGTGCGCATTCAGGATGATGCCGTCATTG CGGCCGTAGAGTTATCAAGCCGGTATATTTCCGACCGTTTTTTGCCCGATAAGGCCATTGACCTGATGGACGAAGCCGCT GCCAAACTGCGTTTGGAGATGGATTCGGTACCCGAAGAACTCGACGACCTCAACCGCCGCATCATGCAGTTGGAAATCGA ACGGGAAGCCATTCGTCGCGAAAACGATAAAGACAAAGAAACGCGCCTGAACAAAGAAATTGCCGACCTGAGCGAAGACC GAAACGCCCTCAAAGCGCAGTGGGAACTGGAAAAAGGCAAAATCAGCGAAGTGCGTACGCTCAAAGAGCAGTTGGACCAG CTGCGACTGGAAGCCGAGCAGGCCGAGCGCGCCGGCGATTACGGAAAGGTAGCGGAACTTCGTTACGGTAAGATTCCTGA AATTGAGCAAAAATTGGCCGGTGATATCGGTGAAAATCAATCCAACCAATTGCTCAATGAAGAAGTAACGCCCGAACACA TCGCGGAAGTAGTGGCCAAATGGACGGGGATTCCGGTCAGTAAGATGCTGCAAAGCGAGCGCGACAAATTACTGAATCTG GAAACGGAACTTCAAAAACGCGTGGCCGGACAGGAAGAAGCCATCGAAGCCGTAGCCGATGCCGTTCGCCGCTCACGGGC GGGGCTGCAAGACCCCAAACGCCCCATCGGGAGCTTTTTGTTCCTCGGGCCAACGGGCGTAGGAAAAACCGAACTGGCCA AAACCCTCGCCAATTACCTGTTCAACGATGAAAACGCCATGGTGCGCATCGACATGAGCGAGTACCAGGAACGCCACTCG GTCAGCCGTTTGGTGGGAGCGCCTCCCGGCTACGTGGGCTACGACGAAGGCGGTCAGCTGACCGAGGCCGTCAGACGCAA GCCGTACAGCGTGATCTTGCTGGATGAGATCGAAAAGGCTCACCCGGATGTATGGAACATCATGTTGCAGGTATTGGACG ACGGCCGCCTGACCGATAACAAAGGACGGATGGCCAACTTCAAGAATACCATCATCATCATGACCTCCAACATCGGCAGC GATATCATCATGGAGAAGTTCAAAGAAGCGGGCAACAAAACCGACAAAGGTTGGAAGCTGTACTTCAAAGAAGAAGCCAA AAACGATGTATTGGGCCTGTTGAAACAAACCGTTCGACCTGAGTTCCTAAACCGTATTGACGAGATCGTGCTCTTTGACC CACTGAGCCACGACAACCTCAAACAAATTGTCCGGATTCAGTTCAACCACATCAAGGGCCTGCTCGCCGAGCAGGGCGTT ACGCTGGATGCTACCGACGAGGCATTGCTCAAGCTTTCGGAAGAGGGCTACGAACCCGCCTTTGGTGCCCGACCGCTGAA ACGTGTCCTTCAGCGCCGCATTCTGAACGAGTTGTCAAAACAGATCCTGAGCGGCAAGATCACCAAAGACTCCATTATCA TGATGGAACTCGGCGAAAACGGCGAAGTCGTTTTTGAGAATATATCGGAAGCGAAACTGGAATTGTAA Protein sequence : MNFNQYTIKAQEVIQRAVQIAQSNQQQAVETGHVLQAILEDDPNTSQFLMKKLNVQPQVLQTRIQATVNAYPKVAGTAAT EYISNDLNSAFQKAQTYLKEFQDEFVSVEMLFLGLATGKDATARLMQEAGFKEKELLAAIKELRGKNNPVKDQNAEAKYR SLERYSKNLNEMARAGKIDPVIGRDDEIRRVLQILARRTKNNPMLLGEPGVGKTAIVEGLAQRIVQGDVPEQLKTKEIVS LDMGLLIAGAKYKGEFEERLKAVIKEVTDSDGQVILFIDEIHTLIGAGAGGEGAMDAANLLKPALARGELHTIGATTTKE YQKYIEKDKALERRFQVVTVDEPNELDAISILRGIKDKYELHHGVRIQDDAVIAAVELSSRYISDRFLPDKAIDLMDEAA AKLRLEMDSVPEELDDLNRRIMQLEIEREAIRRENDKDKETRLNKEIADLSEDRNALKAQWELEKGKISEVRTLKEQLDQ LRLEAEQAERAGDYGKVAELRYGKIPEIEQKLAGDIGENQSNQLLNEEVTPEHIAEVVAKWTGIPVSKMLQSERDKLLNL ETELQKRVAGQEEAIEAVADAVRRSRAGLQDPKRPIGSFLFLGPTGVGKTELAKTLANYLFNDENAMVRIDMSEYQERHS VSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVILLDEIEKAHPDVWNIMLQVLDDGRLTDNKGRMANFKNTIIIMTSNIGS DIIMEKFKEAGNKTDKGWKLYFKEEAKNDVLGLLKQTVRPEFLNRIDEIVLFDPLSHDNLKQIVRIQFNHIKGLLAEQGV TLDATDEALLKLSEEGYEPAFGARPLKRVLQRRILNELSKQILSGKITKDSIIMMELGENGEVVFENISEAKLEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 7e-153 | 47 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-103 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-103 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Runsl_1557 | YP_004655114.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 1e-123 | 45 |
| Runsl_1557 | YP_004655114.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 3e-108 | 44 |
