|
Name : Runsl_1056 (Runsl_1056) Accession : YP_004654619.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1234557 - 1235825 bp Length : 1269 bp Strand : + Note : PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; KEGG: bth:BT_4152 beta-galactosidase I; SPTR: uncharacterized protein; manually curated DNA sequence : ATGCTACAACTGAATTTTATCCGTGAAAACCGCGACCTGACAATCACGGGTTTAGAACGCAAATATTTTAAAGGAGCTGC CGAAGCCGTTGACAGACTTTTGGGATTGGACAGACAGCGCCGCGATACCCAAGGGGAACTCGATGCCACGTTATCCCAAT CCAATACCCTGGCTAAGCAAATCGGGCAGTTGATGAAGGAAGGAAAAAGGGAGGAGGCTGAAGCCGCCAAGTCCCAAACC GCCACGCTGAAAACACGCGCCAAAGCCCTGGAAGAGAGCCTTAAAGAAGTTGAGGTACAATTACAGGCTACGTTGGTCCT GTTGCCCAACCTTCCCCACGAAAGCGTGCCGCCGGGCCGCACCCCCGAAGAAAACGTAGAAGTGTACACGTGGGGCGAAA AGCCTAACCTACCGGAAGGCTCCAAGCCACATTGGGAACTGATCGAGCAATACGACATTATTGATTTCAAACTCGGCACC AAGATCACGGGCGCGGGTTTTCCCGTATACAAAGGCAAAGGTGCGCGGTTGCAGCGGGCCATGATTCAGTTTTTTCTGGA CCAAGCGGTGGAAGCAGGCTATCTGGAAATTCAGCCGCCGATTCTCATCAATGCCGAATCAGGCTTTGGTACGGGGCAGT TGCCCGACAAAGAGGGCCAAATGTACCACGCCACCGCCGACGACCTGTACCTGATCCCGACCGCCGAAGTGCCGATCACC AACCTGTACCGCGACGTCATCGTGGCCGAAAACGACCTTCCGATCAAAAATGTAGGCTATACGCCCTGTTTTCGCCGTGA GGCGGGCAGCTGGGGTGCACACGTGCGCGGCCTGAACCGCTTGCATCAGTTTGACAAGGTAGAGATCGTACAGGTACGCA AAGCCGAAGAATCGTATCAGGCACTCGACGAAATGGCCGAGCACGTCAAAGGACTGCTTCAAAAGTTGGAATTGCCCTTC CGCATCATCCGTCTTTGCGGCGGTGATATGGGCTTTACGTCGGCGTTGACGTTTGATTTTGAAGTGTGGTCGGCGGCGCA GGCCCGCTGGCTGGAATGCAGCTCAGTCTCTAACTTTGAGACCTACCAGGCCAATCGCCTGAAGCTGCGCTATAAAACCG AAGGCAAAACGCAACTGCTTCATACCCTCAACGGCTCGGCGCTGGCATTGCCCCGCATCCTGGCGGCATTGCTCGAAAAC AACCAAACGCCCGAAGGTATTCGCATTCCAAAGGCATTGGTGCCGTATTGTGGCTTTGAAATGATTTAA Protein sequence : MLQLNFIRENRDLTITGLERKYFKGAAEAVDRLLGLDRQRRDTQGELDATLSQSNTLAKQIGQLMKEGKREEAEAAKSQT ATLKTRAKALEESLKEVEVQLQATLVLLPNLPHESVPPGRTPEENVEVYTWGEKPNLPEGSKPHWELIEQYDIIDFKLGT KITGAGFPVYKGKGARLQRAMIQFFLDQAVEAGYLEIQPPILINAESGFGTGQLPDKEGQMYHATADDLYLIPTAEVPIT NLYRDVIVAENDLPIKNVGYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVQVRKAEESYQALDEMAEHVKGLLQKLELPF RIIRLCGGDMGFTSALTFDFEVWSAAQARWLECSSVSNFETYQANRLKLRYKTEGKTQLLHTLNGSALALPRILAALLEN NQTPEGIRIPKALVPYCGFEMI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-67 | 46 |
