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Name : sctV, cdsV (PUV_07790) Accession : YP_004651583.1 Strain : Parachlamydia acanthamoebae UV-7 Genome accession: NC_015702 Putative virulence/resistance : Virulence Product : type III secretion integral inner membrane protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 866198 - 868258 bp Length : 2061 bp Strand : - Note : - DNA sequence : ATGGCAATGATCATCATCCCGGTTAATCCGCATATCATCGACTTCTTAATCGCCTTAAACTTAACGGCTTCAGTAGCGCT TTTGATGGTAGCCCTTTACATCCCCAGTGCTGTGCACCTTTCCATTTTCCCCTCCCTACTTCTGATTACGACGTTGTATC GGCTGGGGGTTAACATTGCTTCCACACGACAAATTTTGCTTCATGCGAATGCCGGTGATATTATTTTCCAGTTCGGTCAA TTCGTGGTGGGTGGTAACTTCGTTGTCGGTGGTGTTATCTTTCTTATCATCACGCTTGTGCAGTTTATTGTGATCACCAA GGGTGCGGAACGGGTAGCGGAAGTCGCAGCACGTTTCACTTTGGATGCGATGCCTGGTAAGCAAATGAGTATTGACGCCG ATATGCGCGCTGGTATCCTCGATTCAAATCAAGCCCGAGAAAAACGTCTAGCCATCCAAAAAGAGAGCCAGTTATATGGT GCGATGGATGGTGCGATGAAATTCGTTAAAGGGGATGCGATTGCAGGTATCGTGATCACCCTGATCAACATCATCGGGGG GATGATCATCGGGATGACATTGAATGGCATGCCTGCTATGGATGCCGTAACAACTTATTCTCTCCTCTCTATTGGGGATG GTCTCGTATCTCAAATCCCCGCCCTATTAATCTCGATTACGGCCGGTATTGTCACAACCCGTGTCTCGAGCGATAAAGCC GAAAGTAACTTGGGTAGTGAGATCTCGGGTCAAATTTTAAAACAACCAAAAGCGCTGTTGATTTCCGCTGGATTCTTAAT GGGTATGGCAGCTATTCCCGGTTTCCCAAAACCTCCTTTTTTGATCTTTGCCTCCGCTTTAGGACTTTTAGGCTACTCTC TTTGGGTTTCCGAAAAACAAAAAGTAGAAGCTGCTAGAACGGGAGGAGGAGCTGGAGGAGGGACAATCTCTTCTGCGGCC GATACCTCCACGGTAGATATGGGTGTCCAAGGACACAAGGTGGTCTCGGGTGGTGGTATAGATAGCTACGCTTTAACACT TCCCGTGGTATTAGAGTGCGGATCGAGCTTAAGCCAAGAAATTCAAAAAGCACAAAAGGGACAAAGCTTTATCGACAAAA TGATTCCGAAGATGCGCCAGGCACTTTATGCGGATTTAGGTGTGAGATTCCCAGGTGTACACGTCAGAACAGACTCCCCT ATTTTGGAAAAAGATGAATATTCGATTCATTTAAACGAAGTCCCCATTGTCAAAGGTCGAGTTTTAGAAGGATTTGTTCT CACCAATGAAAGTGAAGAAAACTTGAAACGTTATAATCTTTCTTACACAACCTATAAAAGTGCCTTGGGTCTTCCATCGC TTTGGGTAGAAAGCAAAAATATTGATTTGCTTAACAAAGCAGGTGTCAAGTACTGGAATTCTCTAGAAGTGATGATTTTG CATATTTCGTACTTCTTCCGTACATACGCCAACGAATTTGTGGGAATTCAAGAAGTCAAATCGATGTTGGAATTCGTGGA AAAATCATTCCCCGACCTTGTCAAAGAAGTCACTCGCTTAATTCCTCTTCAAAAGATGACGGACATTTTCAAACGTCTCA TCCAAGAACAGGTCTCAATTAAAGACTTAAGAACCATTCTCGAATCCTTAAGCGAATGGGCCCAGACCGAAAAAGATACA GTGCTTTTAACTGAATACGTTCGTTCCTCTTTAAAACGATATATTAGTTACAAATATTCACAGGGGCAGTCTGTTCTTTC TGTGTATATCTTAGATCCCGAAATCGAAGACATGGTGCGCGGTGCGATTAAGCAAACATCTGCAGGGTCATACCTTGCAC TCGATCCCGATTCAGTTCAGCTCATTTTGCAGGGTGTCCGCAACACCGTTGCGCCTCCGCCTCCAGGCGGGCAGCCTCCT GTATTGTTAACTGCCATTGACGTTAGACGCTTTGTGAGAAAATTGATTGAAATGGAATTTACTGATATTTCGGTCGTCTC GTACCAAGAAATTGTACCTGAAATCCGTATTCAACCCCTAGGACGTGTCCAATTGACCTAA Protein sequence : MAMIIIPVNPHIIDFLIALNLTASVALLMVALYIPSAVHLSIFPSLLLITTLYRLGVNIASTRQILLHANAGDIIFQFGQ FVVGGNFVVGGVIFLIITLVQFIVITKGAERVAEVAARFTLDAMPGKQMSIDADMRAGILDSNQAREKRLAIQKESQLYG AMDGAMKFVKGDAIAGIVITLINIIGGMIIGMTLNGMPAMDAVTTYSLLSIGDGLVSQIPALLISITAGIVTTRVSSDKA ESNLGSEISGQILKQPKALLISAGFLMGMAAIPGFPKPPFLIFASALGLLGYSLWVSEKQKVEAARTGGGAGGGTISSAA DTSTVDMGVQGHKVVSGGGIDSYALTLPVVLECGSSLSQEIQKAQKGQSFIDKMIPKMRQALYADLGVRFPGVHVRTDSP ILEKDEYSIHLNEVPIVKGRVLEGFVLTNESEENLKRYNLSYTTYKSALGLPSLWVESKNIDLLNKAGVKYWNSLEVMIL HISYFFRTYANEFVGIQEVKSMLEFVEKSFPDLVKEVTRLIPLQKMTDIFKRLIQEQVSIKDLRTILESLSEWAQTEKDT VLLTEYVRSSLKRYISYKYSQGQSVLSVYILDPEIEDMVRGAIKQTSAGSYLALDPDSVQLILQGVRNTVAPPPPGGQPP VLLTAIDVRRFVRKLIEMEFTDISVVSYQEIVPEIRIQPLGRVQLT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 2e-135 | 48 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 2e-100 | 43 |
| escV | AFO66414.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 8e-95 | 41 |
| escV | AFO66296.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-94 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sctV, cdsV | YP_004651583.1 | type III secretion integral inner membrane protein | VFG2126 | Protein | 0.0 | 67 |
| sctV, cdsV | YP_004651583.1 | type III secretion integral inner membrane protein | VFG0064 | Protein | 5e-141 | 48 |
| sctV, cdsV | YP_004651583.1 | type III secretion integral inner membrane protein | VFG0384 | Protein | 3e-137 | 48 |
| sctV, cdsV | YP_004651583.1 | type III secretion integral inner membrane protein | VFG0198 | Protein | 6e-132 | 48 |
