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Name : clpC (PUV_04840) Accession : YP_004651288.1 Strain : Parachlamydia acanthamoebae UV-7 Genome accession: NC_015702 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 521476 - 524031 bp Length : 2556 bp Strand : - Note : - DNA sequence : ATGTTTGATAAATTCACCAACCGCGCTAAGCAAGTGATCAAGTTAGCAAAAAAAGAAGCTCAGCGGTTAAATCATAACTA TTTAGGTACAGAGCATGTCTTGCTAGGGCTTCTTAAGCTAGGCCAAGGAGTTGCCGTCAACGTCTTGCGCAATCTAAACA TCGATTTTGAAACCGTTCGCGCAGAAGTAGAAAAACTAGTGGGATATGGCCCTGAAATTCAAGTCTATGGCGATCCCGCC TTAACAGGAAAAGTTAAAAAAGTATTCGAGTATGCTAACGAGGAAGCCGCCAATTTAAATCACAATTATGTCGGCACCGA GCACCTTCTCTTAGGCTTGCTTAGACAAACAGATGGGGTTGCAGCTCAAGTCCTAGAAAACCTTAACGTTAACTTGAAAG AAGTGCGTAAAGAAGTTCTAAAAGAGCTTGAAACCTTCAATCTTCAGCTACCTCCGATTGGAACAAGTGGTGGCACGCAA GAACCTTCACAGTCTCGCCCATCGGCTTCGGCGAATCCAAAACCGTTCGAGAAGCCGACAGGAAGTACAGGAAATTCGAC AGATAAAATGCCAGCACTCCGTGCATATGGACATGATTTAACAGAAATGTCGCGCGAAGGGAAAATGGACCCTGTGATAG GCCGTCGTGAAGAGGTTGAACGTTTAATCTTGATTTTATGTCGCCGACGCAAAAACAACCCCGTGTTAGTGGGTGAAGCC GGTGTGGGTAAAACCGCGATTGTGGAAGGATTAGCGCAAGCGATAGTCAAAGGGGAAGTTCCAGACAATTTGCGTAAGAA AAAGCTAATTACRCTCGACCTTGCCCTCATGATTGCGGGAACGAAATACCGAGGACAATTTGAAGAGCGCATTAAAGCTG TCATGGAAGAAATCAAGAAAAACGGCAACGTCCTTCTCTTTATTGACGAATTGCACACGATTGTGGGAGCAGGTGCTGCA GAAGGTGCTATCGATGCATCTAATATCTTAAAACCCGCGCTTTCACGTGGTGAATTGCAGTGTATTGGTGCAACCACTGT TGATGAATACCGCAAGCACATTGAAAAAGATGCTGCTCTAGAGCGCCGCTTTCAAAAGATTATCATTCAACCTCCAAGTG TGGATGAAACCATTCAGATTTTGACGGGACTCAAAAGCAAATATGAAGAGCACCACAAGTGTATCTACACCGAACAAGCC CTACATGCCGCAGCTATTTTGTCAGACCGCTATATCCACGGACGTTTCCTCCCRGATAAAGCGATTGACTTGATTGATGA AGCAGGTGCTAAAATGCGCATTTCGATGATGAATCAACCTCAGGATATCAGCAAGTTCGAGACAGAAATTGAAGATATTC GCCTTGGAAAAGAAGAGGCCATTGGCAAGCAAGAATATGAAAAAGCTGCAAAATTGCGCGATAAAGAGAAAACATTAAGA GAGCAACTTCAACAGCTTAGAGCACAGTGGGAAATCAATAAAGAAGAGCATGAAGTGGTGGTCGAAGACGAGGACATTGC GAATGTCGTGGCCCGTCAGACWGGAATCCCRATTAATCGACTCACAGAAGGCGAAACACAAAAAGTGCTCAAAATGGAAG AAATCTTACGCAATAGCATTATTGGTCAAGATGAAGCCATTAGAACAGTCAGCAGAGCCATTAGACGTAGCCGTGCCGAC ATTAAAGATCCAAATCGCCCCATTGGTGCCTTTATGTTCCTTGGGCCTACAGGTGTTGGAAAAACCTTATTAGCGCGATT GTTGGCTATTCATCTTTTTGGCGGAGAAGATGCYCTCATTCAGGTGGACATGTCTGAATATATGGAAAAATTTGCAGTCA GCCGCATGACAGGTTCTCCTCCCGGATATGTGGGACATGAAGAAGGWGGCCAGCTCACWGAACAAGTTAGACAGCGCCCT TATTCTGTCGTGCTTTTCGATGAGATTGAAAAGGCGCACCCAGATGTGATGGACTTGCTCCTGCAAATTTTGGAAGAAGG GCGCCTTTCAGACTCCTTTGGACGCAAAGTTGACTTCCGTAATACCATCATTATCATGACTTCTAACTTGGGTGCCGACC TAATTAAGAAGAGCACAGAAGTAGGCTTTGGCGCAATGGAAGGCTCCATGGATTATGCACATATTAAAGAGAAAATTGAA AAAGCGACCAAGAAACACTTTAAGCCAGAATTCTTAAACCGTTTGAATGACATGGTCATTTTCCATCCACTCAAGCGCGA AGCTCTCTTACAAGTGATTGAACTGGAAATTGTCAAAGTGCAGAAGAGACTTGCYCGTCGAGACATTACCATTGAGCTCG ATGCAAAAGCAAAAGACTTCTTGGTCGATCAAGGATTCCAACCAGAGATGGGTGCGCGTCCYTTGCGTCGCACCATCGAA CAGTATTTGGAYGATCCMCTAGCCGAAAAAATCTTAATGCACCCAGACGAAAAGTTGCATTATTTTGTTTCAGCTGAAGG AGACCATCTGATTTTGACAGAGAAGGATAAGCAACAAAATCAGGAAAACTCGATTTCCTTACCAAGTTCACTTTAA Protein sequence : MFDKFTNRAKQVIKLAKKEAQRLNHNYLGTEHVLLGLLKLGQGVAVNVLRNLNIDFETVRAEVEKLVGYGPEIQVYGDPA LTGKVKKVFEYANEEAANLNHNYVGTEHLLLGLLRQTDGVAAQVLENLNVNLKEVRKEVLKELETFNLQLPPIGTSGGTQ EPSQSRPSASANPKPFEKPTGSTGNSTDKMPALRAYGHDLTEMSREGKMDPVIGRREEVERLILILCRRRKNNPVLVGEA GVGKTAIVEGLAQAIVKGEVPDNLRKKKLITLDLALMIAGTKYRGQFEERIKAVMEEIKKNGNVLLFIDELHTIVGAGAA EGAIDASNILKPALSRGELQCIGATTVDEYRKHIEKDAALERRFQKIIIQPPSVDETIQILTGLKSKYEEHHKCIYTEQA LHAAAILSDRYIHGRFLPDKAIDLIDEAGAKMRISMMNQPQDISKFETEIEDIRLGKEEAIGKQEYEKAAKLRDKEKTLR EQLQQLRAQWEINKEEHEVVVEDEDIANVVARQTGIPINRLTEGETQKVLKMEEILRNSIIGQDEAIRTVSRAIRRSRAD IKDPNRPIGAFMFLGPTGVGKTLLARLLAIHLFGGEDALIQVDMSEYMEKFAVSRMTGSPPGYVGHEEGGQLTEQVRQRP YSVVLFDEIEKAHPDVMDLLLQILEEGRLSDSFGRKVDFRNTIIIMTSNLGADLIKKSTEVGFGAMEGSMDYAHIKEKIE KATKKHFKPEFLNRLNDMVIFHPLKREALLQVIELEIVKVQKRLARRDITIELDAKAKDFLVDQGFQPEMGARPLRRTIE QYLEDPLAEKILMHPDEKLHYFVSAEGDHLILTEKDKQQNQENSISLPSSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_004651288.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 53 |
| clpC | YP_004651288.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 2e-154 | 49 |
