Gene Information

Name : kdpA (PUV_26220)
Accession : YP_004653426.1
Strain : Parachlamydia acanthamoebae UV-7
Genome accession: NC_015702
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase A chain
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : -
Position : 2883986 - 2885677 bp
Length : 1692 bp
Strand : -
Note : -

DNA sequence :
ATGTCAATTCCTAATGGGATACAAATTCTCGTATTTCTTGCACTTCTTTTAATTGTCACTCCCCTTCTAGGGCAATATAT
CGCTGCGATTTTTTCTGAAAAAGATCCTTTAATGAAACGCGTTTTGGGAAGGCTAGAAGATGGCTGTTATCAAATGGGCG
GAGTGGATCCTCATCTCGAAATGACTTGGCAAGAATATGCAAAAGTCTTAGGGATTTTTAATTTATTGGGTTTTATTTTT
CTTTTTTTTCTACTGCTTTTGCAAGGCATTCTTCCTTTGAATCCGCAACATTTTCCCGGTGTTTCCTGGCATCTTGCCTA
TAATACTGCGATAAGTTTTGTCACGAATACAAATTGGCAGTCCTATGCGGGGGAAACCACATTGAGCTATTTGACGCAAA
TGGTAGGTTTAACCGTGCAAAATTTCTTAAGTGCTGCTACGGGAATGGCCACCTTGTTGGTTTTGGTTCGAGGCATGACT
CGAAAAATGGTGAACACAGTTGGAAATTTTTGGTGTGATCTTGTAAGGACGATTGTCTATTTGTTGTTGCCACTTTCCAT
TATCATGGCAATTTGTTTAGTTGCAGAGGGGGTTGTGCAAACGTTTTCTCCTTATGTCGAAGCAATTGGTTTGGAAGGCC
ATGAACAAACAATTCCGCTCGGTCCGGTTGCATCTCAAGTTGCAATTAAGCAATTGGGAACGAACGGTGGAGGCTTTTTT
AATACCAATAGTGCCCACCCTTTTGAAAATCCTTCCGCGTTCAGTAATTTTTGGGAGGCGTTTGCTATATTAGTCATTCC
AGCTGCAACTGTTTATGCTTATGGCATTATGATCGGATCAAAGAAGCATGCCTGGATTTTGTATGTCGTTATGTTGTTAT
TGTGGATGGGAGGTCTTGGATTGTCCCTTTATTCGGAGAATTTAGCCAATCCTATTTTAGATGCCTTTCCCCATTTGGAA
GGGAAGGAGACACGTTTTGGTGTAGCAAATAGTCTTTTATGGACAGTGAGTACAACCGGAACATCGAATGGATCTGTTAA
TGCGATGATTTCGAGCCTTTCACCAATGGCGGGTGGAATAGCTATGTTCAATATTATGCTAGGAGAGCTTATTTTTGGGG
GCGTGGGCGTTGGTTTATGCGCAATGTTGATGTATACCATTTTAACCGTTTTTCTTTCAGGCTTGATGGTGGGAAGAACA
CCAGAGTATTTGGGTAAAAAAATTGAGAAACAAGAAGTCAAATGGGTCATGCTATCTGTGCTTATGCCGAGTGCTTTAAT
TTTATTAGGTTCCGGGGTTTCGAGTATTTTACCTAAAGCTTTGAGTAGCCTCTCTAATCAGGGACCTCATGGGCTTTCTG
AGATCTTATATGCCTTTTCATCGGCAGCAGGAAACAATGGAAGTGCTTTTGCGGGTTTAAATGCGAACACCCCCTATTAC
AATTTGGTTTTAGGTACGATCATGCTCATCTGCAGAATTTCAACCATTCTTCCCAGCTTGGCCATCGGGGGATTACTGGC
AGAAAAAAAGTTTATTCCCCCCTCAATCGGAACCTTTTCTGCGGAATCATTGCTATTTGCCATTCTTTTGGGAGGAATTA
TTTTGATTGTAGGAGGTCTTGTATTTTTTCCAGCTTTTGCTTTAGGACCAATTGTCGAGCATTTTTTAATGTTAAAGAAA
GTGTCATTCTGA

Protein sequence :
MSIPNGIQILVFLALLLIVTPLLGQYIAAIFSEKDPLMKRVLGRLEDGCYQMGGVDPHLEMTWQEYAKVLGIFNLLGFIF
LFFLLLLQGILPLNPQHFPGVSWHLAYNTAISFVTNTNWQSYAGETTLSYLTQMVGLTVQNFLSAATGMATLLVLVRGMT
RKMVNTVGNFWCDLVRTIVYLLLPLSIIMAICLVAEGVVQTFSPYVEAIGLEGHEQTIPLGPVASQVAIKQLGTNGGGFF
NTNSAHPFENPSAFSNFWEAFAILVIPAATVYAYGIMIGSKKHAWILYVVMLLLWMGGLGLSLYSENLANPILDAFPHLE
GKETRFGVANSLLWTVSTTGTSNGSVNAMISSLSPMAGGIAMFNIMLGELIFGGVGVGLCAMLMYTILTVFLSGLMVGRT
PEYLGKKIEKQEVKWVMLSVLMPSALILLGSGVSSILPKALSSLSNQGPHGLSEILYAFSSAAGNNGSAFAGLNANTPYY
NLVLGTIMLICRISTILPSLAIGGLLAEKKFIPPSIGTFSAESLLFAILLGGIILIVGGLVFFPAFALGPIVEHFLMLKK
VSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 7e-67 50
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 5e-67 50
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-45 43
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-45 43
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-45 43
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 2e-45 43
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-45 43
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 6e-45 42