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Name : xcpR (PUV_25660) Accession : YP_004653370.1 Strain : Parachlamydia acanthamoebae UV-7 Genome accession: NC_015702 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2810798 - 2812432 bp Length : 1635 bp Strand : - Note : - DNA sequence : ATGGAAGGTAGTAGAGAAAATCTGGACCCTCAGAAAAAATTGGGGGGAAAAGCAATTCCAGAAACTTTGAAAGATCCTAA TTTGGTATTGGCAGAACAATTCAAGCTGCCTATTTTTATGGAGCTTTCAAGTCTTAGACTACCTCGAGAATATTACAAAA AAGTTCCTTATTCATTCGCAAAAAGACATTGTGTCCTGCCTATTCAAGAAGAAAAAGATGCCATTTTAGTGGCAGTTGCT GATCCCTTGAATTTAGAGCCTCTGGAAGAACTGCGTTTGATGTTAAATGTAGACGTTAAACCGGTTTACAGTCCTAAAGA TGTGATTCTTGCTGCCATTAATGAATGTTATAATCAGGAGTTTGGAGCTGCTTCGCAGCTGATCGCAAATCTTGCTGATC AATCGGAAGATGGCCGAGGCGATGGTGAAGTTGAAGTTTACGATTTGCTTGATGATTCTCAGATGCAAGCTCCTATTGTC AAGCTCTTGAATTTGATTCTTACCGAAGCGATTCAACAAGGTGCTTCTGATATCCATTTTGAACCCTTAGAAGATGGCTT ACGTGTCCGTTATCGGATCGACGGTATTCTACAGAATCGACATTCCCCAGCAGTTGAGTTTCAAGCGCAGCTTTTAACAC GTATCAAGGTGATGGCTAAGCTGGATATTGCAGAACATCGTCTTCCTCAGGATGGACGTATTAAATTGCGGATGGGCAGA AGAGAGATTGATTTTCGGGTGAGTACCGTCCCAATAGCTGCCGGAGAGCGTATTGTCTTGCGTATCCTAGATAAAGGAAA TGTAATTTTAGGGTTAGACAAATTGGGCATGCTTCCTGCTGTCCTTGAGGAATTTAAACGTTTAATAGCTTTACCTGAAG GCATCGTATTAGTCACTGGGCCCACAGGGAGTGGAAAAACAACATCGCTATATAGTGCCATTTTTGAAATGTATAGCGAA GAAACAAATATTATGACGATTGAAGACCCTGTTGAATATAATTTAAAAGGGATTGCTCAGATTGGTGTACGTCATAAAAT TAAATTAGATTTTGCCACGGGCTTAAGGCATATTCTTCGCCAGGATCCTGATATTATCATGATTGGGGAGATTCGCGATT TGGAAACTGCTGAAATTGCGATTCAAGCTTCTTTAACAGGTCATTTAGTATTAAGTACTTTGCACACCAACGATGCCCCT TCCTCTATCACACGTCTAGTCGACATGGGAATTGAACCTTATCTTCTTTCTTCCACTATTGTGGGGGTTTGTGCTCAGCG CTTAGTCCGCCGCATATGTCCTTCCTGTAAAACGGCTTACAAGCCAACAGATCGAGAGCTTGCCAGCCTCGGTTTACAAC GAGATGAATTAACAGATGGCAATTTATTTGTCGGCGAAGGTTGTTCCGCTTGTTATGGAACAGGATATCGTGGACGGCAT GGGCTCTATGAACTGATGTCTATCAATAATGCCATCAAAAAGCAAATTGTCAAAAGTGCAGATGCTGTTGAAATGCGAGA TGTAGCGCTCAATACAGGGATGATTGGATTGTTAAATCATGGTGCCGAATTAGCTAAAAAAGGGGTGACGACAAGCGCTG AAGTTCTGAGAGCTGCACGCGGGTTGGAGGATTAG Protein sequence : MEGSRENLDPQKKLGGKAIPETLKDPNLVLAEQFKLPIFMELSSLRLPREYYKKVPYSFAKRHCVLPIQEEKDAILVAVA DPLNLEPLEELRLMLNVDVKPVYSPKDVILAAINECYNQEFGAASQLIANLADQSEDGRGDGEVEVYDLLDDSQMQAPIV KLLNLILTEAIQQGASDIHFEPLEDGLRVRYRIDGILQNRHSPAVEFQAQLLTRIKVMAKLDIAEHRLPQDGRIKLRMGR REIDFRVSTVPIAAGERIVLRILDKGNVILGLDKLGMLPAVLEEFKRLIALPEGIVLVTGPTGSGKTTSLYSAIFEMYSE ETNIMTIEDPVEYNLKGIAQIGVRHKIKLDFATGLRHILRQDPDIIMIGEIRDLETAEIAIQASLTGHLVLSTLHTNDAP SSITRLVDMGIEPYLLSSTIVGVCAQRLVRRICPSCKTAYKPTDRELASLGLQRDELTDGNLFVGEGCSACYGTGYRGRH GLYELMSINNAIKKQIVKSADAVEMRDVALNTGMIGLLNHGAELAKKGVTTSAEVLRAARGLED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-89 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-89 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpR | YP_004653370.1 | general secretion pathway protein E | VFG0182 | Protein | 5e-93 | 50 |
| xcpR | YP_004653370.1 | general secretion pathway protein E | VFG2048 | Protein | 6e-90 | 48 |
| xcpR | YP_004653370.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-76 | 45 |
| xcpR | YP_004653370.1 | general secretion pathway protein E | VFG0233 | Protein | 2e-81 | 45 |
