Gene Information

Name : metC (PUV_18690)
Accession : YP_004652673.1
Strain : Parachlamydia acanthamoebae UV-7
Genome accession: NC_015702
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2064751 - 2065896 bp
Length : 1146 bp
Strand : +
Note : -

DNA sequence :
ATGAAATTCGCAACAAAAGCTATCCATATTGGCTATGAGCCAGAACCTCTTTATGGGGCAGTCATGCCGCCCATTTACAT
GACATCCACTTTTGAACAAGAGGCTCCAGGTCAAACGAAAGGATATGATTACACACGAGGCGGCAACCCCAATTTTACTC
TTCTAGAAAACCTGTTAGCTTCTTTGGAAAATGCCCAGTATGCCACCGTATTTTCTTCCGGAATAGGAGCCTTAACAGCC
TTGGTCAGCCAACTAAAACCGGGCGATAAAGTGATTGGAATGAATGGCGTTTACGGAGGAACATACCGCCTTTTTCATCG
CATTTTTGCTCCCTTTGGTGTCCAGTTTCAATCGATTAATCCCTCAAGCCATGATGAACTTGAAGCAACTTTAAAAAAAG
AAGCCCCAAAGTGGCTGCTTTTTGAAACGCCTACAAATCCCCTCTTGGAAGTTTTTGATATTGAGTTGCTCGCAAAAATA
GCTAAAAAGCACGGCATATTAAGCATTGTAGATAACACCTTTGCAAGCCCTTACTGTCAAAATCCGCTAGATTTAGGTGT
AGATATCGTATGGCATAGCACAACGAAATACATTGGAGGACACTCAGATGTAATTGGCGGCGTTGTAATGACCAATGACG
CAGAGCTAAAAAAAGAACTCAATTTTCGACGCCTTTCATTAGGCGTTAACCCAAGCCCTTTTGATACGTGGTTGATTACA
CGTGGAGTCAAGACATTGGCTGTGCGCATGGAGCAACATCAAAAAAACGCCTTTGCTATTGCACAGTTTTTAGAACAACA
TCCAAAAGTTAAAAAAGTTTACTATCCAGGACTTCCAAGTCATTCTGGACACGTGATTGCTAAAAAACAGATGCGTAATT
TTAGTGGAATGGTTTCGGCAGAATTTCAACTTGAGCTCGAGCAGACAAAAAAACTCATTTCATCTTTTAAGCTTTTTTCG
CTCGCTGAAAGCTTAGGCGGCGTGGAATCTCTCGTCAATCACCCTGCTTTGATGACTCACCTCTCGATTCCTCCCGAAGA
GCGAAAAAAGATGGGAATCACCGACGGGTTAATTCGCTTTTCAATAGGAATTGAAGACGCAGAGGACTTGATCGAAGATC
TCGACCAAGCCCTGCAAAAAATTTAA

Protein sequence :
MKFATKAIHIGYEPEPLYGAVMPPIYMTSTFEQEAPGQTKGYDYTRGGNPNFTLLENLLASLENAQYATVFSSGIGALTA
LVSQLKPGDKVIGMNGVYGGTYRLFHRIFAPFGVQFQSINPSSHDELEATLKKEAPKWLLFETPTNPLLEVFDIELLAKI
AKKHGILSIVDNTFASPYCQNPLDLGVDIVWHSTTKYIGGHSDVIGGVVMTNDAELKKELNFRRLSLGVNPSPFDTWLIT
RGVKTLAVRMEQHQKNAFAIAQFLEQHPKVKKVYYPGLPSHSGHVIAKKQMRNFSGMVSAEFQLELEQTKKLISSFKLFS
LAESLGGVESLVNHPALMTHLSIPPEERKKMGITDGLIRFSIGIEDAEDLIEDLDQALQKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-68 46
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-69 46
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 6e-48 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC YP_004652673.1 cystathionine beta-lyase BAC0207 Protein 5e-56 41