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Name : lysS (PUV_16930) Accession : YP_004652497.1 Strain : Parachlamydia acanthamoebae UV-7 Genome accession: NC_015702 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1904768 - 1906333 bp Length : 1566 bp Strand : + Note : - DNA sequence : ATGTCGATTACACCTGAGTATCTCCAGCATGAAGAATATCAAAATCGTAAAAGAAAGCTTGGAGAAATTCGAGAATTAGG AATTGATCCTTATCCAGCTTCCTATAAACCTCAAGATACAGCACAAAAACTCCAGACCACTTATGGCCATTCAGCAATTG GTCACAGTGAGGATGCGGCTGCTGGATCTACTCAAACAGCCTCTGTAGCTGGACGTTTAATTTTATTTAGAGCTATGGGA AAAAATGCTTTTGGTCATATTCAAGATGCATCAGGACGCATACAAATCATGTTCAATCGCGATCTCACCCAAGTGACTGG TTACACACCACAGGGAGAAGAAGCTTTAAGTCCCTTTAAATTTATTGAAAAGAAAATTGACTTAGGCGACATCATCGGTA TTGAAGGAAATCTTTTCCATACGAATAAAGGGGAACTCACGATTTTTGCAAAACGTGTGACTCTGCTTTGTAAAACACTC CTTCCTCTACCTGATAAACATGCTGGATTAAGTGACAAGGAACAAAGATACCGAAAAAGATGGCTTGATCTAATCGCCAA TGAGCACGTAAAAAATACATTCCTTCTGCGCACACAGATTCTCCGTTTTGTACGGAAATTCCTTGATGATGCCCACTTCA CTGAAGTTGAAACCCCCATCCTCCAAAGTGTGTATGGAGGTGCAGAAGCACGTCCTTTCTTGACTAAACTCAACGCTCTC GATCAAGAAATGTTCATGCGCATTTCGTTAGAACCTTCTTTGAAAAAATTGATTGTCGGGGGAATAGACCGCGTTTACGA AATTGGAAAAGTTTTCCGTAATGAAGGGATTGACCGCAGCCACAATCCAGAATTCACATTAATGGAAGCCTATGCTTCTT ATTGGGATTACAAAGATATGATGGTTTTCTGTGAGAATCTTTTCGAGAAAATGGCCCTCCACCTCTACGGAACAACGGAA GTACCTGCACTTTCACTCGAGACACAACAACCGATTAAAATCCATTTTAAAGCTCCTTGGAAACGTCTCACGATGAAAGA AAGTTTAATCGAGTACGCCAAAATCAATCCTGACGATCTTACTGATCAAGAAATGCGTGAAATGCTTTTGGCAAGTGAAA CATGTGATCCTAAAAAAATTACCCCCCTCACAAGAGGTCTTCTGATCGCTGCACTATTTGAAACGTTTGTTGAGCAACAT TTGATTCAGCCCCATCATATAACGGATCACCCAATCGAGACTGCTATTCTGTGCAAACCAAAAGCGAATGAAGAAGGATT AATTGAAAGATTTGAGAGTTTTGTTTTGGGAGGAGAAATTTGCAATGCCTACTCCGAGCTGAATGACCCGGAACTGCAAA GAAAACTTTTTGATGAACAATCAAAACGCAGAGATTCTGGGGATGAAGAAGCCAGTCCTGTTGATGAAGAGTTCATCGAA GCTATTCACCAAGGTATGCCACCAACTGGTGGGATTGGTATTGGAATTGACCGTTTAGTGATGCTTTTAACAAATGAGCA CTCTATCCGTGATGTCTTGTATTTTCCTTGGATGAAGCCCCAATAA Protein sequence : MSITPEYLQHEEYQNRKRKLGEIRELGIDPYPASYKPQDTAQKLQTTYGHSAIGHSEDAAAGSTQTASVAGRLILFRAMG KNAFGHIQDASGRIQIMFNRDLTQVTGYTPQGEEALSPFKFIEKKIDLGDIIGIEGNLFHTNKGELTIFAKRVTLLCKTL LPLPDKHAGLSDKEQRYRKRWLDLIANEHVKNTFLLRTQILRFVRKFLDDAHFTEVETPILQSVYGGAEARPFLTKLNAL DQEMFMRISLEPSLKKLIVGGIDRVYEIGKVFRNEGIDRSHNPEFTLMEAYASYWDYKDMMVFCENLFEKMALHLYGTTE VPALSLETQQPIKIHFKAPWKRLTMKESLIEYAKINPDDLTDQEMREMLLASETCDPKKITPLTRGLLIAALFETFVEQH LIQPHHITDHPIETAILCKPKANEEGLIERFESFVLGGEICNAYSELNDPELQRKLFDEQSKRRDSGDEEASPVDEEFIE AIHQGMPPTGGIGIGIDRLVMLLTNEHSIRDVLYFPWMKPQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-79 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004652497.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-79 | 43 |
