Gene Information

Name : dps (HMPREF0538_20822)
Accession : YP_004649323.1
Strain : Lactobacillus reuteri SD2112
Genome accession: NC_015697
Putative virulence/resistance : Resistance
Product : DNA starvation/stationary phase protection protein Dps
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0783
EC number : -
Position : 816290 - 816757 bp
Length : 468 bp
Strand : +
Note : COG: COG0783

DNA sequence :
ATGAAATATCAAGAAACCAAAGAAACACTTAATCAATTAGTTGCTGATCTGAGTCAAATGGCAATGATAATTCATCAAAC
TCACTGGTATATGCGTGGCACTAACTTTCTAAAGCTTCACCCATTAATGGACCAATTTATGGATGAAATCAACGATCAAC
TTGATGTAATATCTGAACGATTATTAACTCTCGACGGTGAACCTTATTCGACCCTTAAAGAAGTCGCAACCCATACGAAA
ATTAAAGACTGGCCAGGAAACTTTGATAAAACAACGCCAGAACAGCTTGCGCATTTAGTCGCTGGTTATCGTTATCTTGA
GGACCTTTATCAGCATGGAATTGAAGTGACTGACATTGAAAAAGATTATTCTACCCAAGATATCTTCATTGGATTTAAAA
CGGCAATTGAAAAGAAAATCTGGATGCTGCAAGCAGAATTAGATCAGGCACCAGAAATTGACAACTAA

Protein sequence :
MKYQETKETLNQLVADLSQMAMIIHQTHWYMRGTNFLKLHPLMDQFMDEINDQLDVISERLLTLDGEPYSTLKEVATHTK
IKDWPGNFDKTTPEQLAHLVAGYRYLEDLYQHGIEVTDIEKDYSTQDIFIGFKTAIEKKIWMLQAELDQAPEIDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0606 NP_814364.1 Dps family protein Not tested Not named Protein 2e-39 58
ef0119 AAM75320.1 EF0119 Not tested Not named Protein 1e-39 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dps YP_004649323.1 DNA starvation/stationary phase protection protein Dps BAC0134 Protein 2e-34 53