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Name : HMPREF0538_20594 (HMPREF0538_20594) Accession : YP_004649096.1 Strain : Lactobacillus reuteri SD2112 Genome accession: NC_015697 Putative virulence/resistance : Unknown Product : IS1272 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3666 EC number : - Position : 571557 - 572786 bp Length : 1230 bp Strand : + Note : COG: COG3666 DNA sequence : ATGAAATCTTCGGATTTCATTCAGCTCCGTTTTCCTTTAAAATATAGATATGTTGAAAAAAGAAAAAGACATCGACTGAC CCTCGATGCCTTCAATACCCTCGAAAGGATATACATAATAATGCAAAACAATTATAACATTAATCAATTTACTTTGGCTA TGACAACTGACTATCAACCTGAGAAAAATCATCCGGCTTATTATATTCATCAATTAGTTGAAAACTTAGCAGTTTCTAAA CCCAATGTTATGGGGCGCCCACGTGAATATGATCCTCGCATGCTTTTGAAATTGGTTTTACTAGCTTATAGTTACGGAAT TGTTTCCTGTCGGAAAATTGAAAGGTTTGCTCGAGAGAATATTGTCGCAATGTGGTTAACCCAAGAACAACGCCCCACTT ATCGAACAATTGCTAGATTTATCGTTTCCAAAGAACTGACAGAAATGATTCAAGCTAGTTTTAAAGATTTCCATGATTAT CTTCAAAAGGCTGGGTTGATTGATGAGGCTTCTTTTATTGACGGTACTAAAATTCTTGCTAATGCTAATAAGTATTCCTT CGTATGGAAGAAGCGTACTATCAAATATAGTGATTTGAATGTTGTCAAAGCACAAAAGCTAATTAGTGAGATGCGTGAAG AAGCTAAAGTAGATGCTAGCTTAGACGATTTTCAAATCGATGAATTAGACACTACGATTGCACTGTTAGAACAACGAATT GAAGAACTAAATAAGCGGGTAGAAGAAACCGCTAAGGTTTCGCCTAATCCCGCAAAGCAAGAACGCCGTCAGGCCAAGAA ATACTTTCGTGCATTAGATCATTGTCGTCAGAAAAATCTCAAGTACAAAGCTCAAGTAGCCACCGCTGGTGAACGTAATA GCTATTCTAAAACTGATCATGATGAAACCTTCATGCGCTTAAAGGAAGATCCAATGCGTAACGGTCAAACAAAACCTGCA TATAATCTTCAGATCATGACTAACTCACAGTTCGTGCTTGGCTATGATCTCATGCAAAATCCAACTGACACTCGAACCCT AATCCCATTTCTTAAACATCTTGATCAAAACGGCGTTTTGGGTAAAGAAATAGTAGCTGATGCTGGCTATGGTCCTGAAC ATAATTATAGATATATTGAAGATGAGTTACCTGATTGTACGGCTCTCATTCCCTACAGCACAATGCTTAGAGAGAACAGT CGTAAGTGGAAGTCCGAGATCGTAAAGTGA Protein sequence : MKSSDFIQLRFPLKYRYVEKRKRHRLTLDAFNTLERIYIIMQNNYNINQFTLAMTTDYQPEKNHPAYYIHQLVENLAVSK PNVMGRPREYDPRMLLKLVLLAYSYGIVSCRKIERFARENIVAMWLTQEQRPTYRTIARFIVSKELTEMIQASFKDFHDY LQKAGLIDEASFIDGTKILANANKYSFVWKKRTIKYSDLNVVKAQKLISEMREEAKVDASLDDFQIDELDTTIALLEQRI EELNKRVEETAKVSPNPAKQERRQAKKYFRALDHCRQKNLKYKAQVATAGERNSYSKTDHDETFMRLKEDPMRNGQTKPA YNLQIMTNSQFVLGYDLMQNPTDTRTLIPFLKHLDQNGVLGKEIVADAGYGPEHNYRYIEDELPDCTALIPYSTMLRENS RKWKSEIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAC67565.1 | hypothetical protein | Not tested | Type-IVc SCCmec | Protein | 3e-50 | 42 |
