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Name : HMPREF0538_20498 (HMPREF0538_20498) Accession : YP_004649000.1 Strain : Lactobacillus reuteri SD2112 Genome accession: NC_015697 Putative virulence/resistance : Unknown Product : phage integrase family site-specific recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 493017 - 494594 bp Length : 1578 bp Strand : + Note : COG: COG1961 DNA sequence : TTGGGTAAAGTGAGGATTATCCCCGCTCATCAGCAAAAAGGCAATAGCGTTCAACCGCAAAAAAATAGACTACCATTTGA ACAGCTCCGAGTGGCGGCCTACTGCCGGGTTTCGACTGATTATGATGAACAAGCCAGTTCTTATGAAACTCAAGTGATCC ACTACAAAGAATTAATTCAAAAAGAGCCAACCTGGAAGTTTGCAGGCATCTACGCCGATGATGGGATTTCAGGGACTAAC ACTAAGAAGCGGGAACAATTTAATCAGATGATTGCAGCCTGCAAAGCCGGTAAGATTGACTTGATTGTTACTAAATCAAT TAGTCGGTTTGCCCGAAATACTATCGATTGCCTGAAGTATATCCGGGACTTAAAAGCTATCAACGTGGCAATCTTCTTTG AAAAGGAGAACATTAACACCATGGACGCTAAAGGTGAAGTGCTGATTACCATCATGGCTTCCCTCGCCCAGCAAGAAAGT GAGTCCCTATCGCAAAATGTTAAAATGGGAATTCAGTACCGCTACCAACAAGGTAAGGTCTTCGTCAATCACAACCACTT TCTCGGTTATACCAAGGATGCTCAGGGTAATCTGGTAATTGAACCGGCAGAAGCTAAAGTCATCAAACGGATCTTCTATA GCTATCTAAACGGGATGAGTATGAAACAAATCGCGGATTCACTCAAAGCTGATGGTATTTTAACCGGTGGTAAAACAAAG AACTGGCGCTCTAGCAGCGTGGCTAAAATACTTAAGAACGAGAAATATATGGGTGATGCCCTTCTGCAGAAAACCTACAC TGTTGACTTTCTTAATAAAAAACGAGTGAAGAATGAAGGCATCATGCCCCAGTACTACGTGGAGAATGATCACCCGGCGA TTATTCCTAAATCAGTATTTATGCAAGTCCAGCAACTCATTAAGCAACGGCGTAATGGGATTACCACAAAGAACGGCAAG CACCGGCGACTTAACGGCAAATATTGTTTCTCTCAAATAGTCTTTTGTGGAAAATGCGGCGACATTTTTCAACGGAATAT GTGGTACCGACCAGAAAAAGTAGCGGTCTGGCGCTGTGCAAGCCGAGTAAGACGAAGTAAAACTGGCCGCCGATGCATGA TTCGCAATGTCAAAGAGCCCTTGCTCAAGGAAGCCACCGTCGAAGCTTTTAACCAGCTTATTGAAGGTCATGAGTTAGCT AGTAAACAAATTAAAGCTAACATCATGCAGGTGATAAAAGACTCCCAAGGACCAACACTTGATCAACTTGATAAGCAGCT AGAAGAGGTTCAAATGAAATTGATCCAAGCTGCCAACCAACATCAAGACTGCAATGCCCTCACCCAACAAATTATGGACT TGCGGAAGCAAAAGGAAAAAGTACAAAGCCGGGAGACTAATCAACAAGTAAAACTTCACAGCCTTGAAGAGATCAACGAA CTGGTCGAATTCCACAAGTATGGCTTAGTTGACTTCGATGAAGGCCTAGTTCGGCGCTTGATAGAAAAAATCACCATCTA CCAACGTTACATGGAATTCACGTTCAAAGATGGTGAGGTAATTAGAATTAATATGTGA Protein sequence : MGKVRIIPAHQQKGNSVQPQKNRLPFEQLRVAAYCRVSTDYDEQASSYETQVIHYKELIQKEPTWKFAGIYADDGISGTN TKKREQFNQMIAACKAGKIDLIVTKSISRFARNTIDCLKYIRDLKAINVAIFFEKENINTMDAKGEVLITIMASLAQQES ESLSQNVKMGIQYRYQQGKVFVNHNHFLGYTKDAQGNLVIEPAEAKVIKRIFYSYLNGMSMKQIADSLKADGILTGGKTK NWRSSSVAKILKNEKYMGDALLQKTYTVDFLNKKRVKNEGIMPQYYVENDHPAIIPKSVFMQVQQLIKQRRNGITTKNGK HRRLNGKYCFSQIVFCGKCGDIFQRNMWYRPEKVAVWRCASRVRRSKTGRRCMIRNVKEPLLKEATVEAFNQLIEGHELA SKQIKANIMQVIKDSQGPTLDQLDKQLEEVQMKLIQAANQHQDCNALTQQIMDLRKQKEKVQSRETNQQVKLHSLEEINE LVEFHKYGLVDFDEGLVRRLIEKITIYQRYMEFTFKDGEVIRINM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-125 | 52 |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 2e-121 | 52 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 2e-121 | 52 |
