Gene Information

Name : HMPREF0538_20488 (HMPREF0538_20488)
Accession : YP_004648990.1
Strain : Lactobacillus reuteri SD2112
Genome accession: NC_015697
Putative virulence/resistance : Unknown
Product : peptidase S14, ClpP
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0740
EC number : -
Position : 487006 - 487677 bp
Length : 672 bp
Strand : +
Note : COG: COG0740

DNA sequence :
ATGAAACGTTTCTGGAACTGGAAACAAAATGGTGATCAGCGGCAACTAGCTATCTCTGGGGTAATTGCTCCTGATAGCTG
GGTGCATGACGATGTTTCACCACAGGTATTCCAAGACGAACTTAATGAAAGTCAGGATCCAATCGATCTCTGGCTGAACT
CCCCTGGTGGTGATTGTACCGCTGCCAGTCAAATTTATACCATGCTGATGAATTACCCGAATGAAGTCAATGTCAAAATC
TCAGGTATTGCGGCATCTGCTGCTTCGGTAATTGCGATGGCTGGAACTACTGTTTCAATGGCTCCTGCGGCTATGCTAAT
GATCCACAATCCACTGACTATTGTCGGCGGTCAAGAAAGAGATCTCGACCACGCTGCGCAAATGCTAGCTGAAACCAAGG
AGTCGATCATCAATGCCTATGAGCTGAAAACCAACCTGCCCCGTGAAAAGATTTCAACAATGATGGATAACGAAACTTGG
ATGAACGTCAATAAAGCTATCGAATTAGGCTTTGCTGATGCCATGCTGGGTGACAATAAGAATGTCACAGATTGTTACTC
GTATTCCGATAAGCAATCTGACCTGGTGTTATTGAATAAACTCAAGCCTAAAGCAAAATCTACTATTTCTGTAAAGTCGC
TGCAAAAGCGGCTTTCTTTGTTATCACACTAA

Protein sequence :
MKRFWNWKQNGDQRQLAISGVIAPDSWVHDDVSPQVFQDELNESQDPIDLWLNSPGGDCTAASQIYTMLMNYPNEVNVKI
SGIAASAASVIAMAGTTVSMAPAAMLMIHNPLTIVGGQERDLDHAAQMLAETKESIINAYELKTNLPREKISTMMDNETW
MNVNKAIELGFADAMLGDNKNVTDCYSYSDKQSDLVLLNKLKPKAKSTISVKSLQKRLSLLSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1103 YP_005736598.1 Prophage Clp protease-like protein Not tested ¥ÕSa2 Protein 5e-18 42
SAV1964 NP_372488.1 phiN315 scaffolding protein-like protein Not tested ¥ÕSa3 Protein 3e-18 42
SA1775 NP_375073.1 hypothetical protein Not tested ¥ÕSa3 Protein 3e-18 42
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 3e-18 42
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 3e-18 42