Gene Information

Name : HMPREF0538_20472 (HMPREF0538_20472)
Accession : YP_004648974.1
Strain : Lactobacillus reuteri SD2112
Genome accession: NC_015697
Putative virulence/resistance : Unknown
Product : phage protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 470952 - 472091 bp
Length : 1140 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTCACCAAAACATCATGCTTTGCTATCAGCTTCCAGTGCTAACCGCTGGTTAAGCGCTCCGCCACTTCCACGGTT
GGAACAATACTTTCCACATTCTACTTCAAGTGCTGCCGCTGAAGGAACTGCTGCCCATGCCTTAGGTGAATATAAGATTC
ATCGACTGCTTGGCGACAAATTCAAGCGCCCTACCTCTGATTACCAATCAGATGAGATGGAAAACCTAACCGATGATTAC
GCTAGCTATGTTCTGGAACAATATCACAAAGCTAAAGAATACGCACCCGACGCCACCATCCGTGTGGAACAGAAACTGGA
CTTTTCTAAATATGTGCCTGAAGGTTTTGGTACTGGCGACTGCGTAATTGTTTCTGATCACCTACTCCATATTATCGACT
TTAAGTATGGCAAGGGTGTCCGGGTAGAAGCGCAGAACAATCCCCAGATGAAACTCTATGCCGTCGGTGCACTAGAAATG
TTCGGCAGTCTGTACAACGTTGATGAAGTTGAAACGACAATCTTTCAACCTCGGATGGCCAATATTAGTACCTGGACCAT
TAATGCTAAAGAACTAATGCACTGGGCCAATTCCGAATTAAAAGAGAAAGCCGAACTCGCATTTGCTGGCAAAGGTACCG
TCCATTATGGTCCTTGGTGCCAATTCTCCGCTTGTAATGCTGTACTGCGAGCTCGTTTTGACTATCATCACAAGCTCACC
CGCTTTCAACTACGGTCACCGAACTTGCTAACAGATAGTGAGGTAACCGAGGTTCTCGAGCACATCGATGATTTGAATCG
TTGGGCTCACGAAATTAAAGACTATGCCGCTGACCTAGCCATTAACCATGGTAAGCAGTGGCCTGGTTACAAAATAGTCG
AAGGTAGGTCTGTCCGCCATTACAAGGATGAAGCTGCCGTAGCAAAAATTGCTGAAGCTAATGGCTATCACAATATTTAC
CAAAAGAAGCTACTACCAATTACAAAATTAGAAAAACAGCTCGGCAAAAAGAAGTTCGCTGAGCTGTTCAGTCAGGAAAT
TGTTAAACCTGCGGGTAAACCAACTTTAGTACCAAACTCTGATCGGCGTCAGAGTATTGGCAAATCAAACCCACAGGATG
AATTTAAGGAGGAAAAATAA

Protein sequence :
MSSPKHHALLSASSANRWLSAPPLPRLEQYFPHSTSSAAAEGTAAHALGEYKIHRLLGDKFKRPTSDYQSDEMENLTDDY
ASYVLEQYHKAKEYAPDATIRVEQKLDFSKYVPEGFGTGDCVIVSDHLLHIIDFKYGKGVRVEAQNNPQMKLYAVGALEM
FGSLYNVDEVETTIFQPRMANISTWTINAKELMHWANSELKEKAELAFAGKGTVHYGPWCQFSACNAVLRARFDYHHKLT
RFQLRSPNLLTDSEVTEVLEHIDDLNRWAHEIKDYAADLAINHGKQWPGYKIVEGRSVRHYKDEAAVAKIAEANGYHNIY
QKKLLPITKLEKQLGKKKFAELFSQEIVKPAGKPTLVPNSDRRQSIGKSNPQDEFKEEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1449 YP_005681715.1 Protein p51 Not tested PiCp 5 Protein 2e-63 45
CpC231_1448 YP_005683812.1 Protein p51 Not tested PiCp 5 Protein 1e-63 45
CpI19_1455 YP_005685898.1 Protein p51 Not tested PiCp 5 Protein 1e-63 45