Gene Information

Name : rfaG3 (HMPREF0538_20385)
Accession : YP_004648887.1
Strain : Lactobacillus reuteri SD2112
Genome accession: NC_015697
Putative virulence/resistance : Virulence
Product : group 2 glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : 2.4.1.-
Position : 398022 - 398951 bp
Length : 930 bp
Strand : -
Note : COG: COG0463

DNA sequence : 
ATGCCAAAATTGTCAATAGCTGTTCCTTGTTATAATGAGGAAGAAACTATTCCACTTTTTTATCCGGCCGTTGAAAAGGT
AGTTAAACAGATGCCAGTAGAGACTGAGTATTGGTTCATTAATGATGGATCAAGTGACGGAACTTTAACAGAACTGCGTA
AGCTCCATACACAAGATCCAGAACGAGTTCATTATGTTTCTTTTTCACGGAATTTTGGTAAAGAAGCAGGGCTTTATGCG
GGATTACAGGCCGCAACAGGAGATTATGTCGTTGTGATGGACGCTGATTTACAGGATCCACCAGAATATTTACCAGAGAT
GTATAAGGATATTTCTACTGGCGAATATGATTGTGTGGGGATGCGACGGATAGATCGAAAGGGGGAGGCGAAGTTTAAGT
CTTTCCTTTCCAACCAATTCTATAATGTTATTAATAAAATTTCTGATACCAAAATTGTCTCTGGAGCCCGGGATTACCGG
ATGATGACGCGCCAGATGGTGGATGCAGTGTTATCGTTAACTGAATATAACCGGTTCTCAAAAGGTATTTTTAACTGGGT
TGGGTTTAGGACTAAATACCTTCCCTATAAAAATGTCGAACGGGTGGCTGGGACAACAGATTGGTCAACCTGGAAATTAT
TTAAATATGCAATTGACGGGATTACTGATTTTTCAGAAGCTCCCTTGGCGATTGCAACTTTGGCGGGTGGCTTGACAGCC
TTCATTTCCATTATCGGAATGATTATTGTTATAATAAGAAAAATTGTTGAACCGGGTAGTAGTGCCTTTGGCTGGGCATC
AATGGTTTGTATCATTTTATTTCTCGGCGGTATTCAGTTACTCTGTTTAGGAATAGTTGGACGTTACATTGGTCGGATAT
ACATGCAGACAAAGAAACGACCGATTTATATTATTAAAGAGAAAAAGTAG

Protein sequence : 
MPKLSIAVPCYNEEETIPLFYPAVEKVVKQMPVETEYWFINDGSSDGTLTELRKLHTQDPERVHYVSFSRNFGKEAGLYA
GLQAATGDYVVVMDADLQDPPEYLPEMYKDISTGEYDCVGMRRIDRKGEAKFKSFLSNQFYNVINKISDTKIVSGARDYR
MMTRQMVDAVLSLTEYNRFSKGIFNWVGFRTKYLPYKNVERVAGTTDWSTWKLFKYAIDGITDFSEAPLAIATLAGGLTA
FISIIGMIIVIIRKIVEPGSSAFGWASMVCIILFLGGIQLLCLGIVGRYIGRIYMQTKKRPIYIIKEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 9e-43 42
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 8e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rfaG3 YP_004648887.1 group 2 glycosyl transferase VFG0670 Protein 7e-43 43