Gene Information

Name : rnpA2 (HMPREF0538_21771)
Accession : YP_004650270.1
Strain : Lactobacillus reuteri SD2112
Genome accession: NC_015697
Putative virulence/resistance : Unknown
Product : ribonuclease PH/Ham1 protein
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : 3.1.26.5
Position : 1801965 - 1802552 bp
Length : 588 bp
Strand : +
Note : COG: COG0127

DNA sequence :
ATGAAAACAATCGTAATCGCAACAAAGAATGCCGGGAAAGCGCGTGAATACCAAGATATGCTTGCTCCCCTAGGAATTGA
AGTAAAAACATTAGCCGATTTTGCACCAATAGCAATTAATGAAAATGGTAAAACATTTGAAGAAAATGCAACAATTAAAG
CCACTACAGCTGCTAATCAACTCCAACTACCAGTTATGGCAGATGATTCGGGCTTAATGGTTGATGCTCTTGGAGGTGCT
CCAGGTGTACACTCAGCAAGATATGCTGGTGATCATGATGATGCTGCTAACAATGCTAAACTCTTATTGGCGTTAAAAGA
GGTACCGGATGAAAAAAGGACTGCTCACTTTCATACTACCATCGTCGGAATTAAGCCTGATGGAACCAAATTAGTTGCCA
ATGGTCGGGTTGATGGCCATATTCTTCATCAACTCACAGGAGAAAACGGTTTTGGTTATGATCCGCTTTTTTATGTTGAT
GAATTAGGCAAATCAATGGCCCAATTAACAGCAGACCAAAAGAATCAAATTAGTCATCGGGGACGCGCATTACGATCATT
TATGAAGCAATTTAATGATTGGTGGTAA

Protein sequence :
MKTIVIATKNAGKAREYQDMLAPLGIEVKTLADFAPIAINENGKTFEENATIKATTAANQLQLPVMADDSGLMVDALGGA
PGVHSARYAGDHDDAANNAKLLLALKEVPDEKRTAHFHTTIVGIKPDGTKLVANGRVDGHILHQLTGENGFGYDPLFYVD
ELGKSMAQLTADQKNQISHRGRALRSFMKQFNDWW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 2e-22 42