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Name : dapE (HMPREF0538_21588) Accession : YP_004650087.1 Strain : Lactobacillus reuteri SD2112 Genome accession: NC_015697 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : 3.5.1.18 Position : 1606547 - 1607716 bp Length : 1170 bp Strand : + Note : COG: COG0624 DNA sequence : TTGGAAAATGATGAAAAAATAAAACTATTACAGAAGTTAATTCAGATTGATACAGTAAATGGTAACGAAAAGGACGAAGC AAGTTATATTAAAAGGACCTTAGAAGATCATCATATTTCCTGTGAATTAGTTCCTTTTGCACCCAACCGCACCAATTTAA TTGCGGAGATTGGTGATGAAAAGGGGCCGGTACTCGCTCTTTCTGGACATTTAGATACGGTAGCTGCAGGTGATTTCCAA AAATGGACATATCCACCATTTGCTGGCCAATTAGTAGACGGTAAAATCTATGGTCGGGGAGCAGTTGATATGAAGTCGGG ATTGGCAGCCATGGTGGGTGCTTTAATTGAGCTTAAAGAAGCAGGTTTGCCAAAACATGGAAAGGTTCGCTTGATTGCCA CTGTTGATGAAGAAGTTGGTGGTCAAGGTTCTCTTGAAATGACTGATAAAGGGTACGTTCATGATGTTGATGTGATGGTA ATTGGGGAAGCAACTACTGGCCAAATTGAATATGCTCACTGTGGCTCTTTTGATTATATTGTTGAGTCTTATGGAAAATT GGCTCATAGTTCGCAACCAGAATTGGGAATTAATGCTGTTACAAATCTAGTGAAATTTATCAATAAAGAATCACGGGCGT TTGACGATGCAGCAGTAAGTCCCACCCTAGGAAAATTAATTCATAGTGTGACTGTCTTTCATGGTGGAGAGCAGTTAAAT TCAATTCCTGATTACGCATATTTGAAGGGGAATGTTCGCACGATTCCAGAATGTGATAATCGGGAAACAGGAAAAAGACT ACAATCAATCATTGATGAGTTAAACAAGGAGACAGGGGTTGAATTAAAACTAAAGATAGTTGCTAGTTTTATGCCAGTGG TTACAAATAAGCAAGATCGCTTCATTGCACTTGCTCAAACGGCAATTAAAAAGGTTAGCGGCAGGCAACCGGATGTAGTG ATTTCTCATGGGGCAACGGATGCATCCCGCTATGTTTTAGACAATCACAATTTTCCAATAATTGAATACGGACCAGGGAT TGAAAAGTTATCACACCAAATTGATGAACGTATTGCGCTTGATGATTATTTAACGGCTCAGCAAGCTTACGTTGAAATTG CTAAACAATATTTGAATAATACTAAAGACGATGAACAGGCTAGTAGTTAA Protein sequence : MENDEKIKLLQKLIQIDTVNGNEKDEASYIKRTLEDHHISCELVPFAPNRTNLIAEIGDEKGPVLALSGHLDTVAAGDFQ KWTYPPFAGQLVDGKIYGRGAVDMKSGLAAMVGALIELKEAGLPKHGKVRLIATVDEEVGGQGSLEMTDKGYVHDVDVMV IGEATTGQIEYAHCGSFDYIVESYGKLAHSSQPELGINAVTNLVKFINKESRAFDDAAVSPTLGKLIHSVTVFHGGEQLN SIPDYAYLKGNVRTIPECDNRETGKRLQSIIDELNKETGVELKLKIVASFMPVVTNKQDRFIALAQTAIKKVSGRQPDVV ISHGATDASRYVLDNHNFPIIEYGPGIEKLSHQIDERIALDDYLTAQQAYVEIAKQYLNNTKDDEQASS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 2e-72 | 43 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 3e-71 | 43 |
