|
Name : pyn (HMPREF0538_21256) Accession : YP_004649756.1 Strain : Lactobacillus reuteri SD2112 Genome accession: NC_015697 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 1254024 - 1255322 bp Length : 1299 bp Strand : + Note : COG: COG0213 DNA sequence : ATGCGAATGGTTGATATCATTGACACCAAAAGAAATGGCGGAGTCCTAAGCGATGAGCAATTACAATTCTTTGTTGATGG CGTCGTTAATGGAACTATTCCTGACTATCAGATCAGTGCTCTCCTTATGGCAATCTATTTCCAGGATATGACCAAAGAAG AACAGACGAGCCTAACAATGAAGATGATGGAGTCTGGTGAACGATTAGACTTGAGCCGAATCCCTGGAATTAAGGTTGAT AAACATTCAACAGGTGGTGTTGGTGATAAAGTGAGTTTGCCACTTGCAGCAATGGTCGCCGCTACAGGAATTCCGGTTCC GATGATTTCAGGTCGTGGCCTTGGTCATACAGGAGGCACGCTTGACAAGTTAGAAGCAATTCCGGGATTTCGAGTAGAAC TTTCTGAAGATGAATTCATTAATCAAGTTGCTAAAGAAAAATTAGCAATTGTAGGTGCGACTGGTGAGGTTGCGCCAGCA GATAAGAAAATTTATGGATTGCGGGACGTTACTGATACTGTTGACTCGATTCCTTTAATTGCTAGTTCAATTATGAGTAA GAAGATTGCTTCTGGAACAGATGCGCTTGTAATTGATGTTAAAACTGGTACTGGTGCCTTTATGAAGACGCTTGATCAAT CAAGACTACTAGCTAAAGCGTTAGTTGAGATTGGTAAACAAGCAGGATTAAAGTGTATGGCAGTAATCTCAGATATGAAT CAGCCGCTTGGGAATAAAATTGGTAATGCCCTTGAAATTGAAGAATCAATTGATGTCTTAAAAGGAAAGGGACCAAAAGA TCTTACTGAATTAGTCTTGGCGCTTGGTAGTTATATGGTTGTAATGGGTGAAAAAGTACAAAATACTACTGAGGCACGAA AGATGTTAGAGCAAACTATTCAGGAGGGATCAGCCCTGGAAAGGTTTGCGGCAATGATAGAAGCACAAGGTGGAGATCCT GCTGTTGTTGATAACTACCAATTAATGCCGCAAGCTAAATACAAGATTCCTTTCAAGGCTGATCGGGATGGCGTATTGAC AAAACTTTCAGCAGATGAAGTTGGAACTGCTAGCATGTTATTAGGTGGAGGTCGTCAAAAGGCAGATGACACCCTTGACT ATAGTGTAGGAATCGAATTGCACCATAAACTGGGTGACCATGTTAAAGATGGCGAACCAATTTTAACTATCTATAGTAAC CGCCAAGAAATTCCAGACGTAGAACAGTTATTAAAAGAAAGTATTAAAATTAGCGATGATGGCAAAGTACCGACGCTAAT TCATGAAATTATTGAATAA Protein sequence : MRMVDIIDTKRNGGVLSDEQLQFFVDGVVNGTIPDYQISALLMAIYFQDMTKEEQTSLTMKMMESGERLDLSRIPGIKVD KHSTGGVGDKVSLPLAAMVAATGIPVPMISGRGLGHTGGTLDKLEAIPGFRVELSEDEFINQVAKEKLAIVGATGEVAPA DKKIYGLRDVTDTVDSIPLIASSIMSKKIASGTDALVIDVKTGTGAFMKTLDQSRLLAKALVEIGKQAGLKCMAVISDMN QPLGNKIGNALEIEESIDVLKGKGPKDLTELVLALGSYMVVMGEKVQNTTEARKMLEQTIQEGSALERFAAMIEAQGGDP AVVDNYQLMPQAKYKIPFKADRDGVLTKLSADEVGTASMLLGGGRQKADDTLDYSVGIELHHKLGDHVKDGEPILTIYSN RQEIPDVEQLLKESIKISDDGKVPTLIHEIIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 4e-79 | 48 |
