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Name : serS (HMPREF0538_21239) Accession : YP_004649739.1 Strain : Lactobacillus reuteri SD2112 Genome accession: NC_015697 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1235254 - 1236561 bp Length : 1308 bp Strand : + Note : COG: COG0172 DNA sequence : ATGTTAGATATTAAAAAGATTCGTCAAGAACCTGATTTTTATAAGGAAAAGTTAGCTACGCGTGGTGTAAAATCAGAAGA AATTGATGAAGTTATTGCGTTAGATAAAAAGCGACGGGAATTGCTCCAACAAACTGAAACAATGAAGGCGCAACGTAATG AAGCATCAAAGAAGATTGGAGAAGCTAAGCGTAATGGTGAATCTGCCGATGCTGCCATTAAGGAAACTCGTGAACTTGGT GATAAGATCAAGGAATTGGACGCTGAACTTGAAGTAAATGATGCTGAACTCCATGATAAGATGGCTCATCTTCCGAATGT TCCTCACGATGGTGTTCCAGTTAGTTTAACGGAAGACGGTGCCGTTGAATTACGGAGAGTGGGTAAGGTTCGCGACTTTG ATTTTGAGCCTAAGCATCACTGGGATATTGGTGAAAATCTTGGTATTTTAGACTTTGATCGCGCTGGTAAGGTTTCTGGT GCGCGTTTTGTCTACTACTTAGGGCTTGGTGCTCAGCTTGAACGAGCAGTTTACAACTTCATGCTTGATGAACACATGAA GGAAGGATATACCGAAGTCTTACCACCATATATCGTCAATGCTGATTCAATGTACGGTACTGGTCAATTCCCTAAGTTCA AAGAAGGAGTTTACCAAGTTAACGGTGAGGATATGACTTTGATTCCAACTGCTGAAGTTCCATTGACTAATTACTACCGT GGCGAAGTTATCCCAACTGAAGAATTACCAGTTTACGTTACTGCTTTAACACCATCATTCCGTTCTGAAGCGGGAGCAGC GGGTCGTGATACCCGAGGATTGATCCGGATGCACCAATTCAATAAGGTAGAAATGGTTAAATACACTAAGCCAGAGAACT CATGGGATGAACTTGAAAAGATGACGGCTAACGCTGAAAATATCTTGAAGAAGTTAAACTTGCCATACCATGTTATTACC TTAACTACTGGTGACATGAGCTTTACTGCATCTGAAACCCATGATCTTGAATTGTGGATGCCAGCACAAAATAAGTATCG TGAAGTTTCAAGTTGTTCAAACTGCTTGGACTTCCAGGCACGGCGGATGCACACACAATACCGGGATGAAAATGGTAAGT TACAATATGTTCACACACTTAACGGTTCTGGTTTAGCCGTTGGTCGGACAGTTGCAGCTATCTTGGAAAACTATCAAAAC GCTGATGGTTCCGTAACGATTCCAGAAGTATTGGTACCATACATGCATGGTGTTACTAAGATTACTAAGGAAAATGCGGT TCCTTTCCGTAATAAAGTTAATAAATAA Protein sequence : MLDIKKIRQEPDFYKEKLATRGVKSEEIDEVIALDKKRRELLQQTETMKAQRNEASKKIGEAKRNGESADAAIKETRELG DKIKELDAELEVNDAELHDKMAHLPNVPHDGVPVSLTEDGAVELRRVGKVRDFDFEPKHHWDIGENLGILDFDRAGKVSG ARFVYYLGLGAQLERAVYNFMLDEHMKEGYTEVLPPYIVNADSMYGTGQFPKFKEGVYQVNGEDMTLIPTAEVPLTNYYR GEVIPTEELPVYVTALTPSFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPENSWDELEKMTANAENILKKLNLPYHVIT LTTGDMSFTASETHDLELWMPAQNKYREVSSCSNCLDFQARRMHTQYRDENGKLQYVHTLNGSGLAVGRTVAAILENYQN ADGSVTIPEVLVPYMHGVTKITKENAVPFRNKVNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-134 | 65 |
