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Name : clpL (HMPREF0538_21190) Accession : YP_004649690.1 Strain : Lactobacillus reuteri SD2112 Genome accession: NC_015697 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpL Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1168991 - 1171228 bp Length : 2238 bp Strand : + Note : COG: COG0542 DNA sequence : ATGGCTCAAAACCCAATGAATCCATTTGACAACGACATGAATGACATCTTTAATCAATTAATGGGTGGCATGAATGGTTT CAATTCTGATAATCGGCGTTACCTAATCAATGGTCGTGAAGTGACACCAGAAGAATTTGCTGAATATCGTAGAACTGGTC AATTGCCAGGCAGTGCAAATCCTCAACAAGGTGGGCAACCTGGCCCTCAACCTAACGCAGGTAAGGACAGTATCTTACAC AAGTTAGGTCGAAACTTAACTCAAGAAGCTCGTGAACATGAACTTGACCCTGTTATTGGTCGGAACAAGGAAATCCAAGA AACAGCTGAAATTTTAAGCCGGCGGACAAAGAACAACCCTGTATTAGTTGGGGACGCTGGTGTTGGTAAGACTGCTGTTG TTGAAGGATTAGCACAAGCAATTGTTTCCGGCGATGTACCAGCTGCTATCAAGGACAAGGAAATTATCAGTATCGATATT TCTGGTCTTGAAGCAGGTACCCAATACCGTGGTAGCTTTGAAGAAAACATGCAAAAGTTGGTTGATGAAGTCAAGAAGGC TGGAAACATTATCCTCTTCTTTGATGAAATTCACCAAATTATCGGTGCCGGTTCAACTGGTGATTCTAGTGGTTCTAAGG GTATGTCTGACATTATTAAGCCAGCATTATCCCGTGGTGAACTAACAGTTATCGGTGCAACTACTCAAGATGAATACCGG AACACTATTATGAAGGATGCTGCATTAGCACGGCGGTTCAATGCTGTTACTGTTAATGCTCCAAGCAAGGCTGATACTGT AGCTATTCTTAAAGGTATCCGTGACTTGTACGAACGTCACCACAATGTAAAGTTACCAGATGACGTTCTCCAAGCTGCTG TTGATTACTCTGTTCAATACATGCCACAACGTGCATTACCTGACAAGGCTATCGACTTAATCGATATGACTGCTGCTCAC TTAGCAGCAAAGCATCCTGCACGTGATGCTAAGGCAATTGAAAAAGATATCGAAGCAGAAGAAAAGAAGCAAAAAGCTGC TGCTAAGAAAGAAGATTACAAGGCTGCTCAAGATGCCAAGGAAAAGATTGCTGACTTGAAGAAGCAATTGAGCGAAAACT CTGAATCTGAAAAGGTTACTGCTACTCCAGAAGATGTTGCTAAGGCTGTAGAACAAATTACTGGAATTCCAGTTTCAAAG ATTGGTGCTAGTGACGTTGAACGTCTAAAGGACATGGACAAGCGGCTTGAAGGCAAGGTTATTGGCCAAGACAAAGCTGT TGAAGCAGTTGCTCGTGCTATTCGTCGTAACCGTGCTGGATTTGACGAAGGCGATTCACCAATTGGTAGTTTCCTCTTTG TTGGACCTACTGGTGTTGGTAAGACTGAACTTGCTAAGCAATTAGCCCTTGATATGTTTGGCAGCAAAGACGATATTATT CGGTTAGATATGTCTGAATACTCTGACCGGACAGCTGTATCTAAGATGATCGGTGCTACTGCTGGTTATGTTGGTTATGA AGACAACGGTAATACCTTGACTGAAAAGGTTCGTCGTCACCCTTATTCAATTATTCTTCTTGATGAAATTGAAAAGGCTA ACCCACAAGTTATCACCCTCTTGCTTCAAGTACTTGATGATGGTCGCTTAACTGATGGACAAGGTAATACTATTGACTTT AAGAATACTGTTATCATTGCTACATCAAACGCCGGCTACTCCAACGATGCTCCAGTTAAGATGGGTCGGAACGAAGATGA AGAAGACTTAATTAAGAAGTTGACTGCTTACTTCCGTCCTGAATTCTTGAACCGGTTCAACGCCATTGTTGAATTCCACA GTTTGACTAAGGAAGACTTGAAGCAAATCGTTGACTTAATGCTTGCTGAAGTTAACCGGACATTAGCTAAGAAGGGAATG CATGTTAAGGTTACTGATGCTGCAAAGCAATACCTTATTGATGAAGGTTACGATGAAGCCATGGGTGCTCGTCCTCTTCG TCGGGTTATCGAACGTGAAATCCGTGATAAGGTAACTGATTACTACCTTGACCACCTCGATGCAAAGAACCTTGTTGCTG AAATGAAGGATGGCCAACTTGTAATTGTTGACGCTAAGGACGCCTCAAAAGACGATAGTAAAGAATATACCTCACCATCT GAAAAAAAGGATGAAGAAAAAAACGATAAGAAGGAAGAAGACAAGAAGTCTGACGAAGATAAGAAAGACGAAAAGTAA Protein sequence : MAQNPMNPFDNDMNDIFNQLMGGMNGFNSDNRRYLINGREVTPEEFAEYRRTGQLPGSANPQQGGQPGPQPNAGKDSILH KLGRNLTQEAREHELDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVSGDVPAAIKDKEIISIDI SGLEAGTQYRGSFEENMQKLVDEVKKAGNIILFFDEIHQIIGAGSTGDSSGSKGMSDIIKPALSRGELTVIGATTQDEYR NTIMKDAALARRFNAVTVNAPSKADTVAILKGIRDLYERHHNVKLPDDVLQAAVDYSVQYMPQRALPDKAIDLIDMTAAH LAAKHPARDAKAIEKDIEAEEKKQKAAAKKEDYKAAQDAKEKIADLKKQLSENSESEKVTATPEDVAKAVEQITGIPVSK IGASDVERLKDMDKRLEGKVIGQDKAVEAVARAIRRNRAGFDEGDSPIGSFLFVGPTGVGKTELAKQLALDMFGSKDDII RLDMSEYSDRTAVSKMIGATAGYVGYEDNGNTLTEKVRRHPYSIILLDEIEKANPQVITLLLQVLDDGRLTDGQGNTIDF KNTVIIATSNAGYSNDAPVKMGRNEDEEDLIKKLTAYFRPEFLNRFNAIVEFHSLTKEDLKQIVDLMLAEVNRTLAKKGM HVKVTDAAKQYLIDEGYDEAMGARPLRRVIEREIRDKVTDYYLDHLDAKNLVAEMKDGQLVIVDAKDASKDDSKEYTSPS EKKDEEKNDKKEEDKKSDEDKKDEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-124 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpL | YP_004649690.1 | ATP-dependent Clp protease, ATP-binding subunit ClpL | VFG0080 | Protein | 8e-140 | 49 |
| clpL | YP_004649690.1 | ATP-dependent Clp protease, ATP-binding subunit ClpL | VFG0079 | Protein | 8e-134 | 48 |
