Gene Information

Name : ywqD (HMPREF0538_20113)
Accession : YP_004648616.1
Strain : Lactobacillus reuteri SD2112
Genome accession: NC_015697
Putative virulence/resistance : Virulence
Product : non-specific protein-tyrosine kinase
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : 2.7.10.2
Position : 110520 - 111263 bp
Length : 744 bp
Strand : -
Note : COG: COG0489

DNA sequence :
ATGTCATTATTTCATCGAACACAACAACAATCAACCGATACCATGAATAATGGGGCTAAATTGATTACCGTTGCTCATCC
AAAGAGCCCAATTTCTGAACAGTTCCGGACGATTCGGACTAATATTAATTTCATGGCGATTGATAAGCCGATTAAGACAT
TAGCCATGACTTCCGCCAACGTAAGTGAAGGAAAATCAACCGTAACAGATAATGTGGCAGTCGTGTGGGCACAAACAGGA
CAAAGAGTATTATTAATTGATTCCGATTTACGGCGGCCAACCCTTCACGCCACTTTTAGCAAGAATAATCAACATGGGTT
AACGACAATTTTGACTAGTGGAACTAATTCCGTTGATTTACACGAAATTATTCAACCTAGTGGGGTCAATAATCTTGATA
TCTTAACAGCAGGGCCCATTCCGCCTAATCCTGCAGAATTATTAAACTCACAGCGAATGAAGACATTACTGGATACGGTT
AAAGGTATTTACGATATGGTCATTGTGGACGTACCACCAATGCTCGAAGTTACTGATACGCAAATCTTGTCACGTCATCT
TGATGCTGTAGTTCTTGTTGTAAAGCAGGGACAAACTCAAAAATTGGCCGTTAAGCGAGCCGTTGAACTGTTGAACTTAG
CACACGCCAATTTGTTAGGTTATGTAATGAACGATGTTAATGCCGATGGTGATGCCGCTTATGGTTATGGATATGGCTAC
GGTTATGGAGAGAATACTAAATAA

Protein sequence :
MSLFHRTQQQSTDTMNNGAKLITVAHPKSPISEQFRTIRTNINFMAIDKPIKTLAMTSANVSEGKSTVTDNVAVVWAQTG
QRVLLIDSDLRRPTLHATFSKNNQHGLTTILTSGTNSVDLHEIIQPSGVNNLDILTAGPIPPNPAELLNSQRMKTLLDTV
KGIYDMVIVDVPPMLEVTDTQILSRHLDAVVLVVKQGQTQKLAVKRAVELLNLAHANLLGYVMNDVNADGDAAYGYGYGY
GYGENTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 6e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ywqD YP_004648616.1 non-specific protein-tyrosine kinase VFG1298 Protein 1e-38 42