Gene Information

Name : ssb (HMPREF0538_21159)
Accession : YP_004649659.1
Strain : Lactobacillus reuteri SD2112
Genome accession: NC_015697
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1136167 - 1136730 bp
Length : 564 bp
Strand : +
Note : COG: COG0629

DNA sequence :
ATGCTTAATCGTGCAGTCTTAACTGGGCGTTTAACAAGAGATCCCGAGTTGCGGTACACAACCAGCGGGACGGCTGTTGT
TTCATTTACGTTAGCTGTTGATCGGCAATTCCGAAACCAAAATGGTGATCGTGATGCTGACTTTATCAATTGCGTTATTT
GGCGTAAATCCGCTGAAAACTTTAGTAATTTTACGCATAAGGGTTCACTTGTTGGAATTGAAGGGCGTATTCAAACCCGG
AATTATGAAAACCAACAGGGTAACCGTGTATATGTTACCGAAGTTGTTGTAGATAACTTTGCATTGTTAGAACCTCGTCA
AAATGGTGGTATGAACCAATCAGGCGTTCAACAGCCATTTAACAATAACCAACAATCGTTTGGTACTCAGGCTCCACAAT
ATGGCAGTCAACCACAACCTGGAAATAATGCTCCTCAAAGTAATCCGTCACCAAGTATGGACAATGGTTTCGATCCCAAT
CAAAATGCTGGCAACCAGTTCCCTGGAAGTAGTGATGATGGTGGTCAATCCATTGATTTAGCTGATGACGAATTACCATT
CTAA

Protein sequence :
MLNRAVLTGRLTRDPELRYTTSGTAVVSFTLAVDRQFRNQNGDRDADFINCVIWRKSAENFSNFTHKGSLVGIEGRIQTR
NYENQQGNRVYVTEVVVDNFALLEPRQNGGMNQSGVQQPFNNNQQSFGTQAPQYGSQPQPGNNAPQSNPSPSMDNGFDPN
QNAGNQFPGSSDDGGQSIDLADDELPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 3e-29 52
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 3e-29 49