Gene Information

Name : HMPREF0538_21068 (HMPREF0538_21068)
Accession : YP_004649568.1
Strain : Lactobacillus reuteri SD2112
Genome accession: NC_015697
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1048470 - 1049159 bp
Length : 690 bp
Strand : -
Note : COG: COG1136

DNA sequence :

ATGTCAAAATTGAAGTTAGTAGACGTTAACAAATATTATGGCGAAGGAATTAGCCGTGTCCATGTTCTTAAGGATGTTAG
TTTTTTTGCTAAAGCGGGAGAACTAAATTTAATTTTAGGACCTTCTGGATCAGGAAAGAGTACCTTTCTAACGATTGCGG
GCGGTTTGCAAACACCTACTTCAGGAAAAGTATTAATTGATGGAATTGATATTGAGAAATTATCTTCTAAAAAACGTGAT
GAACTACGCTTACAGAAGATTGGTTTTATTCTTCAGTCGTATAACCTATTACCCTATCTAAATGTGGCGGATCAATTTAA
GCTTGTTGATCGCATAAAGAAGAATGGGAACGTCTCATCAGAAGCTTTTGATGAATTATTGGAAAAGCTTGCAATAAAGA
AGCTGCTCAAGCAATATCCTTCTGAATTGTCAGGAGGTCAAAACCAGCGGGTAGCGATTGCACGTGCCCTTTATACCAAT
CCCGAGATAATTCTTGCAGACGAACCAACAGCGGCCTTAGATAGTAATTTAGTAAAGACAGTGGGGCAATTATTTCAAGA
TCTGGCTAAAAAGGAAGGAAAAGCAGTGATTGCTGTAACCCATGATTTACGTTTGCGTGAATATGCAGATAATGTTTACG
AGTTAGCTGATGGGAAACTTACATTAAGTAAAAATTCTCCAGACCAATAA

Protein sequence :

MSKLKLVDVNKYYGEGISRVHVLKDVSFFAKAGELNLILGPSGSGKSTFLTIAGGLQTPTSGKVLIDGIDIEKLSSKKRD
ELRLQKIGFILQSYNLLPYLNVADQFKLVDRIKKNGNVSSEAFDELLEKLAIKKLLKQYPSELSGGQNQRVAIARALYTN
PEIILADEPTAALDSNLVKTVGQLFQDLAKKEGKAVIAVTHDLRLREYADNVYELADGKLTLSKNSPDQ

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	7e-38	47
SARLGA251_00480	YP_005754062.1	ABC-type transport system ATPase	Not tested	Type-XI SCCmec	Protein	2e-37	45

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
HMPREF0538_21068	YP_004649568.1	ABC transporter ATP-binding protein	CP001581.1.gene798.p	Protein	7e-30	43
HMPREF0538_21068	YP_004649568.1	ABC transporter ATP-binding protein	CP001581.1.gene598.p	Protein	1e-26	42
HMPREF0538_21068	YP_004649568.1	ABC transporter ATP-binding protein	NC_012469.1.7686878.	Protein	6e-26	41