Gene Information

Name : HMPREF0538_21036 (HMPREF0538_21036)
Accession : YP_004649537.1
Strain : Lactobacillus reuteri SD2112
Genome accession: NC_015697
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1288
EC number : -
Position : 1015369 - 1015977 bp
Length : 609 bp
Strand : -
Note : COG: COG1288

DNA sequence : 
ATGATTTGGGGAGTAATGGCCAAAGGATGGGCCTTTCCTAATATGGCATCAGCTTTCTTAACAATTGCTATTATTATTAT
TATTATGTTTTTAACTTGTTTCGGGCGCCAAGACGGTTTAGGCGAATATAAGACCACAACAGCTTTTTCTGATGGAGCAG
CTAGCTTAGTCGGTGTGTCATTAATTATTGGTTTGGCACGGGGAATTAATAAAGTGCTTAATGATGGCTATATTTCTGAT
ACAATTCTCTATGCTTCTTCAAAAATGGTTGCGCATATGAATGGATCATTTTTCATTATTGTGATGATGTTGGTATTCTT
TGTCTTAGGCTTTATCGTTCCATCATCATCTGGTTTAGCAGTGCTAGCAATGCCAATTTTAGCGCCACTAGCTGATACGG
TTCATATTCCACGATATACGGTTGTTACTGCATATCAATTTGGGCAATATGCAATGTTATTCTTAGCACCGACTGGATTA
GTAATGGCAACTTTGCAAATGCTTGATATGCGATATTCCCATTGGCTGCGGTTCGTGTGGCCGGTAGTTGTCTTTGTTTT
AATCTTTGGTGGTGGATTGTTGGTAACAGAAGTATTAATTGCAGGATAA

Protein sequence : 
MIWGVMAKGWAFPNMASAFLTIAIIIIIMFLTCFGRQDGLGEYKTTTAFSDGAASLVGVSLIIGLARGINKVLNDGYISD
TILYASSKMVAHMNGSFFIIVMMLVFFVLGFIVPSSSGLAVLAMPILAPLADTVHIPRYTVVTAYQFGQYAMLFLAPTGL
VMATLQMLDMRYSHWLRFVWPVVVFVLIFGGGLLVTEVLIAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAA94653.2 - Not tested Type-II SCCmec Protein 5e-42 74
SAV0069 NP_370593.1 hypothetical protein Not tested Type-II SCCmec Protein 7e-44 73
SA0065 NP_373305.1 hypothetical protein Not tested Type-II SCCmec Protein 7e-44 73