Gene Information

Name : HMPREF0538_21016 (HMPREF0538_21016)
Accession : YP_004649517.1
Strain : Lactobacillus reuteri SD2112
Genome accession: NC_015697
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 993342 - 993551 bp
Length : 210 bp
Strand : +
Note : COG: COG1476

DNA sequence :
TTGAACCGTGTTAAACAATTTCGAAAAGATCAAGGATTATCCCAGTTAAAGCTAGCTCAAAAAATTGGAGTAGCTCGTCA
AACTATCAACTTAATTGAAAATAATAAGTATAACCCCTCGTTAGAACTTTGTATTAATTTAGCTAAAGCATTAAATACTG
ATCTTAATTCACTATTTTGGGAGGAACATACGGATGAAAGAAACAATTAG

Protein sequence :
MNRVKQFRKDQGLSQLKLAQKIGVARQTINLIENNKYNPSLELCINLAKALNTDLNSLFWEEHTDERNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 5e-09 49
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-05 47
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 7e-06 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0538_21016 YP_004649517.1 XRE family transcriptional regulator VFG2175 Protein 3e-06 47
HMPREF0538_21016 YP_004649517.1 XRE family transcriptional regulator VFG2168 Protein 3e-06 47