Gene Information

Name : F7308_0758 (F7308_0758)
Accession : YP_004647285.1
Strain : Francisella sp. TX077308
Genome accession: NC_015696
Putative virulence/resistance : Virulence
Product : capsular polysaccharide ABC transporter ATP-binding protein KpsT
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 769112 - 769765 bp
Length : 654 bp
Strand : -
Note : -

DNA sequence : 
ATGATACAACTTGTAAATGCAACTAAGTTTTATAATATCCGTGGGCATAAGCATTATATCCTCAGAGATGTGAACTATAC
CTTCCCAAAGGGTAAGAGCATAGGTATACTCGGTCGTAACGGTGCTGGTAAATCTACATTTCTGCGTATGCTAGGTGGTC
TAGAGTACCCAAACTCAGGAAAAATAATTACCACCAGCTCAATTTCTTGGCCAGTAGGGCTAACAGCAGGATTCCAAGGA
AGTCTCACAGCTCGTGAGAATATCAGATTTGTCTGTCGAATTCATAACAAAAATCGTCGTGAGATGAAAGAGATTGAAGA
ATTTGTCTATGATTTTGCCGAGATTGGCGAGTTTTTTGATATGCCGGTCAAGTCATATAGCTCAGGTATGAAAGGTAGAG
TTAATTTTGGACTGTCAATGGCATTTGATTTTGATTATTATCTAGTGGATGAGGTTACAGGTGTAGGTGATCCCCAGTTT
ATGAAAAAGGCCAATGACGCATTTAATGAAAAGAAGAAAAGCGCCTGTGTTATCATGGTATCTCACAATATGAAAGAAAT
TAAAGATAACTGTGATATCGCAGTTGTGCTAGATAATGGTAAAATAAATATATTTGATGGTATGGATGAAGCAATAGCAT
CATATCAAAAGTAA

Protein sequence : 
MIQLVNATKFYNIRGHKHYILRDVNYTFPKGKSIGILGRNGAGKSTFLRMLGGLEYPNSGKIITTSSISWPVGLTAGFQG
SLTARENIRFVCRIHNKNRREMKEIEEFVYDFAEIGEFFDMPVKSYSSGMKGRVNFGLSMAFDFDYYLVDEVTGVGDPQF
MKKANDAFNEKKKSACVIMVSHNMKEIKDNCDIAVVLDNGKINIFDGMDEAIASYQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 4e-56 54
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 5e-55 52
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 2e-43 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F7308_0758 YP_004647285.1 capsular polysaccharide ABC transporter ATP-binding protein KpsT VFG1449 Protein 2e-55 52
F7308_0758 YP_004647285.1 capsular polysaccharide ABC transporter ATP-binding protein KpsT VFG0258 Protein 8e-44 45
F7308_0758 YP_004647285.1 capsular polysaccharide ABC transporter ATP-binding protein KpsT VFG0696 Protein 7e-44 44
F7308_0758 YP_004647285.1 capsular polysaccharide ABC transporter ATP-binding protein KpsT VFG2563 Protein 1e-39 42