Gene Information

Name : F7308_1833 (F7308_1833)
Accession : YP_004648357.1
Strain : Francisella sp. TX077308
Genome accession: NC_015696
Putative virulence/resistance : Virulence
Product : lysine decarboxylase, inducible
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1982
EC number : 4.1.1.18
Position : 1878941 - 1881076 bp
Length : 2136 bp
Strand : -
Note : -

DNA sequence :
ATGAAGACAATTGTATTTGTATATAAAGACTCTTTAAAATCCTATAAAGAAAAATTTTTACTAAAGATTGAAAAAGATCT
ACAAAGTTATGAATATCATACTTTAACAGTAGATGATTTATCTGAGGTTGTAGAGATTCTCGAAGATAATTCAAGAATAT
GTTGTATAGTCCTTGATAGAACTAGTTTTAGTATTGAAGCATTTCACAATATTGCGCATCTTAACACTAAGTTACCAGTA
TTTGTCGTTTCTGATTATAACCAAAGTATCAAACTCAATCTGCGTGATTTTAACTTAAATATTAACTTCTTACAGTATGA
TGCTTTAGCTGGCGAGGATTCTGATTTTATCCATAGAACTATCACAAACTACTTCAATGATATTTTGCCACCTTTAACTT
ATGAGCTGTTTAAATATTCCAAATCTTTTAACTCATCTTTCTGTACACCAGGACATCAAGGAGGTTATGGCTTTCAGCGT
TCGGCAGTGGGCGCTTTATTCTATGACTTTTATGGCGAGAATATTTTTAAGACTGATTTATCTATTTCAATGAAAGAGCT
AGGAAGTTTATTAGATCATTCGGAAGCTCACAAAGATGCAGAAGAGTATATTGCAAAAGTTTTCCAAGCTGATAGATCGT
TGATTGTTACCAATGGGACATCAACAGCTAATAAGATAGTTGGTATGTATAGTGTTGCTGATGGCGATACAATTCTTGTA
GATAGAAATTGCCATAAATCAGTTACACACCTAATGATGATGGTAGATGTTAATCCAATATATCTAAAACCAACAAGAAA
TGCTTATGGCATAATTGGAGGTATACCTAAAAAAGAATTTCAGCGCCAAACTATCCAAGAAAAAATTGATAATAGTAGCA
TTGCAGATAAATGGCCTGAATATGCTGTTGTCACAAATTCAACTTATGATGGTATTCTCTATAATACAGATACTATTCAT
CATGAACTAGATGTTAAAAAATTACATTTTGATAGTGCTTGGATACCTTATGCGATATTTCATCCAATCTATAAACATAA
GTCTGCAATGCAGATTGAACCAAAGCCAGAGCATATAATTTTTGAGACACAATCTACTCACAAACTTCTAGCAGCTTTCA
GCCAATCATCAATGTTGCACATAAAAGGTGATTATAACGATGAAGTTTTGAATGAAGCATATATGATGCATACTTCAACA
TCTCCTTTTTATCCAATAGTTGCTAGTGTTGAGACAGCAGCAGCAATGATGGAGGGCGAGCAGGGCTATAATCTTATTGA
CAAAACTATCAATCTAGCGATAGATTTTAGACGAGAGCTAGTTAAGCTTAGATCAGAAGCTGGTGATTGGTTCTTTGATG
TTTGGCAACCTGATAATATTGCTAATAAAGAGGCTTGGCTACTAAGAAATGCTGATAAATGGCATGGATTTAAAAATATA
GATGGTGATTTTTTATCACTAGATCCTATTAAGATAACAATCTTAACTCCAGGCATAAAAGATAACAATGTTGAGGACTG
GGGCGTGCCAGCAGATATAGTAGCTAAGTTTTTAGACGAGCATGATATTGTAGTTGAGAAATCTGGACCTTATTCATTGT
TATTTATCTTTAGTTTAGGCACTACAAAGGCAAAATCAGTAAGGCTAATATCGGTACTTAATAAATTCAAACAAATGTAT
GATGAAAATACATTAGTTGAGAAAATGCTACCAACATTATATGCTGAAGACCCTAAATTCTATGAAGATATGAGAGTTCA
AGAAGTTAGTGAAAGGTTGCATCAGTATATGAAAGAGGCTAATCTTCCTAATCTTATGTATCATGCTTTTAATGTGCTAC
CAGAGCAGCGACTTAATCCTCATAGGGCATTTCAGAAGTTGCTAAAAGGTAAGGTCAAAAAAGTTCCTCTAGCAGAGCTA
TATGGACAGACTTCAGTTGTGATGATATTACCATATCCACCAGGTATACCAGTGATATTCCCTGGAGAAAAAGTAACAGA
AGATTCTAAGGTAATATTAGACTTCTTATTGATGCTAGAAAAGATAGGATCAATGCTGCCAGGATTCGATACAGATATAC
ATGGTCCAGAGAGAGCAAAAGATGGTAAATTATATATCAAAGTGATTGAAGAATAA

Protein sequence :
MKTIVFVYKDSLKSYKEKFLLKIEKDLQSYEYHTLTVDDLSEVVEILEDNSRICCIVLDRTSFSIEAFHNIAHLNTKLPV
FVVSDYNQSIKLNLRDFNLNINFLQYDALAGEDSDFIHRTITNYFNDILPPLTYELFKYSKSFNSSFCTPGHQGGYGFQR
SAVGALFYDFYGENIFKTDLSISMKELGSLLDHSEAHKDAEEYIAKVFQADRSLIVTNGTSTANKIVGMYSVADGDTILV
DRNCHKSVTHLMMMVDVNPIYLKPTRNAYGIIGGIPKKEFQRQTIQEKIDNSSIADKWPEYAVVTNSTYDGILYNTDTIH
HELDVKKLHFDSAWIPYAIFHPIYKHKSAMQIEPKPEHIIFETQSTHKLLAAFSQSSMLHIKGDYNDEVLNEAYMMHTST
SPFYPIVASVETAAAMMEGEQGYNLIDKTINLAIDFRRELVKLRSEAGDWFFDVWQPDNIANKEAWLLRNADKWHGFKNI
DGDFLSLDPIKITILTPGIKDNNVEDWGVPADIVAKFLDEHDIVVEKSGPYSLLFIFSLGTTKAKSVRLISVLNKFKQMY
DENTLVEKMLPTLYAEDPKFYEDMRVQEVSERLHQYMKEANLPNLMYHAFNVLPEQRLNPHRAFQKLLKGKVKKVPLAEL
YGQTSVVMILPYPPGIPVIFPGEKVTEDSKVILDFLLMLEKIGSMLPGFDTDIHGPERAKDGKLYIKVIEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 54
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 6e-171 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F7308_1833 YP_004648357.1 lysine decarboxylase, inducible VFG1670 Protein 3e-171 50