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Name : clpC (KNP414_07553) Accession : YP_004645917.1 Strain : Paenibacillus mucilaginosus KNP414 Genome accession: NC_015690 Putative virulence/resistance : Virulence Product : protein ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 8248776 - 8251220 bp Length : 2445 bp Strand : - Note : Negative regulator of genetic competence ClpC/MecB DNA sequence : ATGATGTTTGGCAGATTTACGGAACGCGCACAGAAAGTGCTCTCTTTGGCTCAAGAAGAAGCGGTACGCTTGGGACATAA CAATATCGGCACAGAGCATATCCTGCTCGGCCTGATTCGTGAAGGCGAAGGGATTGCAGCGAAGGCGCTGATTGCGCTGG GTCTTGGACTTGAGAAAATCCAGGATGAAGTGGAATCCCTGATCGGCAGAGGTCAAGAACAGCCCTCCAATATTGCTTAC ACCCCGCGGGCGAAAAAAGTCATCGAGCTGTCGATGGATGAAGCCCGCAAGCTGGGACACACGTATGTGGGGACGGAGCA TATCCTGCTCGGTCTGATCCGTGAAGGAGAAGGCGTCGCTGCACGCGTGCTCGGCAACCTGGGCGTAAGCCTCAACAAGG CACGCCAGCAGGTGCTTCAGCTGCTTGGCAGCAGCGAAGTAGTCTCGCCGAATCATGGTAACCCGGCCAATGTGAATACG CCGACGCTGGACGGCCTGGCCCGTGACCTGACGGCTTACGCCAAGGAAGGTAACCTCGATCCGGTCATCGGCCGGAGCAA GGAAATTGAGCGCGTAATTCAGGTGCTCAGCCGCCGGACGAAGAACAACCCGGTTCTGATCGGGGAACCCGGCGTAGGTA AGACGGCAATTGCCGAAGGACTGGCCCAGAAAATCGTCGCCAACGAAATTCCGGAAACGCTTCGTGACAAGCGCGTCATG ACGCTGGATATGGGATCCGTGGTAGCCGGTACGAAGTACCGCGGCGAATTCGAGGACCGTCTCAAGAAGATCATGGACGA AATTCGTCAAGCCGGCAACATCGTGCTCTTCATCGATGAGCTTCACACGCTGATCGGTGCAGGGGGAGCGGAAGGCGCGA TTGACGCTTCCAACATCCTGAAACCTGCTCTTGCCCGCGGCGAGCTGCAGTGCATCGGGGCCACGACGCTGGACGAATAC CGCAAATATATTGAGAAAGACGCAGCCCTGGAGCGCCGCTTCCAACCGATTACGGTGGATCAGCCATCGCCGGACGAAGC GATCCAGATCCTGCACGGTCTGCGTGACCGTTACGAAGCGCATCACCGGGTGAAAATCACCGATGAGGCCATCGAACAGG CTGTGAAGCTGTCAGACCGCTACATTCCGGACCGCTTCCTACCGGACAAAGCGATTGACTTGATCGACGAGGCGAGCTCC AAAGTGAGGCTCCGCTCCTATACGGTACCGCCGGATCTGAAGAAGCTCGAAAGCCGGCTTGAGGATATCCGCAAGGAGAA GGATGCTGCGGTGCAGAGCCAGGAGTTCGAGAAGGCCGCATCCCTGCGGGACACGGAACAGAAGCTGCGTGAAGAGCTCG ATTCCACGAAGAATGAGTGGAAGGAGAAGCAGGGCCGCACGGACTCCGAAGTGACACCGGATGACATTGCCCAGGTAGTC GCAAGCTGGACCGGCATTCCGGTCGTGAAGCTGGCGGAGGAAGAGACGCAGCGCCTGCTTCAGATGGAATCGATCCTTCA CGACCGGGTCATCGGTCAGGATGAAGCCGTTAAGGCCGTATCCCGTGCCATCCGCCGGGCGAGAGCAGGTCTCAAGGATC CGAAGCGTCCGATGGGCTCCTTCATCTTCCTTGGTCCTACAGGGGTAGGTAAAACCGAGCTTGCCCGTGCGCTTGCCGAA TCTCTGTTCGGTGATGAAAACTCCGTGATCCGGATCGACATGTCCGAGTATATGGAGAAGCATTCCACCTCCCGTCTGGT AGGGGCGCCTCCAGGATATGTCGGGTACGAAGAAGGCGGCCAGCTCACCGAGAAAGTACGCCGCAAGCCTTACTCGGTCG TGCTTCTCGATGAGATCGAGAAAGCTCACCCGGAAGTGTTCAACATTCTTCTGCAGGTGCTGGAAGACGGCCGTCTGACC GATTCCAAGGGACGTACGGTAGACTTCCGCAACACCCTGATCATCATGACATCCAACGTCGGTGCCGATGTCATCAAGAA GAACTCGACCCTTGGCTTTACCGCCACGATTGATGCCGGCAAAGAGTACGGCAACATGAAGGATAAGGTCATGGGCGAGC TCAAGAAGAGCTTCCGTCCGGAGTTCCTGAACCGGATCGACGAGATCATCGTGTTCCACTCCCTGGACGAAGCGCACATC GGTCAGATCGTTTCCCTCATGGCGGAAGAACTCCGCAAGCGCCTGAAAGAGCAGGAAGTGGACTTTGTTCTGACGGATGC GGCCAAGGCCTTCCTTGCCAAAGAAGGCTATGATCCTTCCTTCGGTGCAAGACCGCTTCGCCGGGCGATCCAGAAGCATA TCGAAGACCGCCTGTCCGAAGAGCTGCTCCGCGGCAACATCAGCAAAGGAGATACGCTCACGATCGACGAGAAAGATGGA GACCTCGTGGTCGAGCGTACCCAAGGGGTAACATCGCAGGCATAA Protein sequence : MMFGRFTERAQKVLSLAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIALGLGLEKIQDEVESLIGRGQEQPSNIAY TPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLGNLGVSLNKARQQVLQLLGSSEVVSPNHGNPANVNT PTLDGLARDLTAYAKEGNLDPVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIVANEIPETLRDKRVM TLDMGSVVAGTKYRGEFEDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEY RKYIEKDAALERRFQPITVDQPSPDEAIQILHGLRDRYEAHHRVKITDEAIEQAVKLSDRYIPDRFLPDKAIDLIDEASS KVRLRSYTVPPDLKKLESRLEDIRKEKDAAVQSQEFEKAASLRDTEQKLREELDSTKNEWKEKQGRTDSEVTPDDIAQVV ASWTGIPVVKLAEEETQRLLQMESILHDRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAE SLFGDENSVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLT DSKGRTVDFRNTLIIMTSNVGADVIKKNSTLGFTATIDAGKEYGNMKDKVMGELKKSFRPEFLNRIDEIIVFHSLDEAHI GQIVSLMAEELRKRLKEQEVDFVLTDAAKAFLAKEGYDPSFGARPLRRAIQKHIEDRLSEELLRGNISKGDTLTIDEKDG DLVVERTQGVTSQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 60 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-100 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_004645917.1 | protein ClpC | VFG0079 | Protein | 0.0 | 76 |
| clpC | YP_004645917.1 | protein ClpC | VFG0080 | Protein | 9e-158 | 53 |
