Gene Information

Name : pdxS3 (KNP414_06898)
Accession : YP_004645283.1
Strain : Paenibacillus mucilaginosus KNP414
Genome accession: NC_015690
Putative virulence/resistance : Unknown
Product : protein PdxS3
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 7581181 - 7582038 bp
Length : 858 bp
Strand : -
Note : Pyridoxal biosynthesis lyase pdxS

DNA sequence :
ATGGAAACAGGTACATCCCGCGTTAAAAAAGGTATGGCCGAAATGCAAAAAGGCGGCGTCATCATGGACGTCATGAATGC
AGAACAGGCCCGTATTGCTGAAGCAGCAGGCGCTTCCGCCGTTATGGCACTGGAACGCGTGCCTTCCGATATCCGTGCGG
CCGGCGGCGTTGCCCGCATGGCTGACCCGACAGTAGTCGAAGAGGTTATGAAGGTAGTCTCCATCCCGGTTATGGCCAAA
GCCCGTATCGGTCATTTTGTCGAAGCGAAGGTCCTCGAATCCATGGGTGTAGACTACATCGATGAGAGCGAAGTGCTCAC
GCCTGCGGACGAAGTGTTCCATATTAATAAGAAAGAGTTCACGGTTCCTTTCGTCTGCGGTGCAAGAGATCTGGGTGAAG
CACTGCGCCGGATCGGCGAAGGTGCTTCCATGCTCCGTACGAAGGGTGAACCGGGAACAGGCAACATCGTGGAAGCCGTT
CGCCACATGCGCCTGATCAACGGCCAAATCCGCAAAATCCAGTCCCTGTCGAAGGACGAGCTTATGGCGGAAGCGAAGAA
CCTGGGCGCTCCTTATGAGCTGCTGCTCCAGGTTCATGAGACAGGCCGTCTTCCGGTCGTTAACTTCGCAGCCGGCGGCG
TTGCCACTCCTGCGGATGCTGCCCTGATGATGCATCTAGGCTCTGACGGCGTATTCGTAGGGTCGGGTATCTTCAAATCG
GATAGCCCGGAGAAATTCGCGAAGGCGATCGTGGAAGCAACTACGCACTACAATGACTACGAGCTGATTGCGAAGGTTTC
CAAAAACCTGGGTACGCCGATGAAGGGCATCGATTTTGCGGAAGTGGCTCAGCGGTAG

Protein sequence :
METGTSRVKKGMAEMQKGGVIMDVMNAEQARIAEAAGASAVMALERVPSDIRAAGGVARMADPTVVEEVMKVVSIPVMAK
ARIGHFVEAKVLESMGVDYIDESEVLTPADEVFHINKKEFTVPFVCGARDLGEALRRIGEGASMLRTKGEPGTGNIVEAV
RHMRLINGQIRKIQSLSKDELMAEAKNLGAPYELLLQVHETGRLPVVNFAAGGVATPADAALMMHLGSDGVFVGSGIFKS
DSPEKFAKAIVEATTHYNDYELIAKVSKNLGTPMKGIDFAEVAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 9e-77 66
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-77 66
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-76 66