Gene Information

Name : thiC (KNP414_00466)
Accession : YP_004638961.1
Strain : Paenibacillus mucilaginosus KNP414
Genome accession: NC_015690
Putative virulence/resistance : Unknown
Product : protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 483355 - 485178 bp
Length : 1824 bp
Strand : +
Note : Phosphomethylpyrimidine synthase

DNA sequence :
ATGACAAGTGAAAACCGGATTGAAAACGGGAATGCTCCCGCAGCGGAAGCGGTACAGGGAGAAGGCGCAGCGGCGAAGAT
CGCCGGCGCGTTCCCGGGCAGCCGCAAAGTATACGTAGAGGGCTCCCGCCCCGATCTGAAGGTCGCGATGCGAGAGATTG
AGCTGAGCCCGTCCACCGGGCGGTACGGGGAAGAGCCGAACGCGCCCGTGCGCGTATACGACACCAGCGGGCCGTATACG
GATGCGGGGGCGAAGACCGATATCCGCCAGGGGCTGCAGCCCAGCCGGCTGCCGTGGATCCTGAGCCGGGAGGACGTCGA
ATCGTACGAAGGCCGCGAAGTCAAGCCGGAGGACAACGGTTATCTGCACGCCGAATCGGTGAAGGAAGAGCTGCTGTTCC
CCGGGCTGAAGCGCCGTCCGCTGCGGGCGAAGGCGGGGAGCAACGTAACCCAGCTGCACTATGCACGTAAAGGCATCATC
ACCCCGGAGATGGAGTATATCGCCATCCGCGAGAATGTCGATCCGGAGTTCGTGCGCAGCGAGGTGGCGCGCGGGCGGGC
GATCATCCCGTCGAATATCAACCACCCGGAGAGCGAGCCGATGATCATTGGGCGCAACTTCCTCGTGAAAGTCAACGCGA
ACATCGGCAATTCGGCTGTCGCTTCCTCGATCGACGAGGAGGTCGAGAAGATGACCTGGGCAATCCGCTGGGGCGCCGAT
AACATCATGGACCTCTCGACGGGCAAGAACATCCACATGACCCGCGAGTGGATTATCCGCAACTCCCCGGTGCCGGTCGG
CACGGTGCCGATCTATCAGGCGCTGGAGAAAGTGAACGGCAAGGCGGAGGACCTGACGTGGGAGGTGTACCGCGACACGC
TGATCGAGCAGGCGGAGCAGGGTGTCGACTATTTTACGATCCATGCGGGTGTGCTCCTGCGCTATATTCCGATGACGGCC
AAGCGGGTGACGGGCATCGTCTCCCGGGGCGGCTCGATCATGGCGGCCTGGTGTCTGGCGCATCATCAGGAGAACTTCCT
GTATACGCATTTTGACGAGATCTGTGAGATCATGAAAACGTATGATGTGGCGTTCTCCCTCGGGGACGGCCTGCGGCCAG
GCTCCATCGCCGACGCGAACGACGAGGCCCAGTTCGCGGAGCTCGATACACTCGGCGAGCTGACGCACCGTGCCTGGAAG
CACGACGTGCAGGTGATGATCGAGGGGCCGGGCCACGTGCCGATGCACCTCATCAAAGAAAACGTCGACCGCCAGCTTGA
GGTATGCGACGAAGCGCCGTTCTATACGCTCGGACCGCTGACCACGGATATCGCGCCGGGCTACGACCACATCACCTCCG
CCATCGGGGCGGCGATGATCGGCTGGTTCGGTACGGCCATGCTCTGCTACGTCACGCCGAAAGAGCACCTCGGCCTCCCG
AACAAGAACGACGTGCGCGAAGGCGTCATCGCCTACAAGATCGCTGCGCATGCCGCCGACCTGGCCAAGGGCCATCCGGG
AGCGCAGGAGCGCGACAATGCGCTGTCCAAGGCCCGCTTCGAATTCCGCTGGCGCGACCAGTTCCACCTGGCCCTCGATC
CCGAACGCGCGATGGAGTACCACGACGAGACGCTGCCGGCCGAAGGCGCGAAGACGGCGCACTTCTGCTCGATGTGCGGG
CCGAAGTTCTGTTCGATGCGCATCACGCAGGATATCCGTGAATATGCGCGGGAGCACGGCTTGGAGGAAGCAGAGGCGCT
GCGGGCCGGCATGGAAGAGAAGTCGAAGGAATACGCCGAGACGGGCAGCGGGGTCTACAGGTAA

Protein sequence :
MTSENRIENGNAPAAEAVQGEGAAAKIAGAFPGSRKVYVEGSRPDLKVAMREIELSPSTGRYGEEPNAPVRVYDTSGPYT
DAGAKTDIRQGLQPSRLPWILSREDVESYEGREVKPEDNGYLHAESVKEELLFPGLKRRPLRAKAGSNVTQLHYARKGII
TPEMEYIAIRENVDPEFVRSEVARGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSAVASSIDEEVEKMTWAIRWGAD
NIMDLSTGKNIHMTREWIIRNSPVPVGTVPIYQALEKVNGKAEDLTWEVYRDTLIEQAEQGVDYFTIHAGVLLRYIPMTA
KRVTGIVSRGGSIMAAWCLAHHQENFLYTHFDEICEIMKTYDVAFSLGDGLRPGSIADANDEAQFAELDTLGELTHRAWK
HDVQVMIEGPGHVPMHLIKENVDRQLEVCDEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLP
NKNDVREGVIAYKIAAHAADLAKGHPGAQERDNALSKARFEFRWRDQFHLALDPERAMEYHDETLPAEGAKTAHFCSMCG
PKFCSMRITQDIREYAREHGLEEAEALRAGMEEKSKEYAETGSGVYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 70
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 70
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 67