Gene Information

Name : serS (KNP414_00016)
Accession : YP_004638539.1
Strain : Paenibacillus mucilaginosus KNP414
Genome accession: NC_015690
Putative virulence/resistance : Unknown
Product : SerS protein
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : -
Position : 20307 - 21587 bp
Length : 1281 bp
Strand : +
Note : Seryl-tRNA synthetase

DNA sequence :
TTGTTAGATGTGAAATTGCTGCGCGGCGATCTCGATCGCGTGAAACAGGGTCTGTCGAACCGGGGCGCAAACCTCGATGA
TCTGGACCGGTTCACAAGTCTGGATACGAATCGCAGACAACTGCTGCAAGAAGTGGAACAGCTGAAGAACCGCCGCAATG
TGGTTTCCCAGGAGGTTGCACAGCTTAAGAAAGCGAAAGAAAATGCGGATCACCTCATTGAAGAAATGAAGGTGGTCGGG
GACCGGATCAAGGCGCTCGACGAAGAAATCCGCGTACTGGAAGCGGACCTGGACAGCATCCTGATGTCCCTTCCGAACCT
GCCGCAGGACAGCGTACCTGTTGGCTCTTCGGAGGAAGAGAATGTGGAGATCCGCCGGGTCGGCGACGTGCCAGCGTTCG
GGTTTGAACCGAAGCCCCACTGGGAAGTAGCCCAGGCGCTCGACATTCTTGATTTCGAGAATGCCGGCAAGGTCACCGGT
TCCCGGTTCGTGTTCTATAAGGGACTTGGAGCGCGTCTGGAACGGGCGCTTATCAACTTCATGATGGACCTGCATGCGGA
TCAGCATGGATACGAAGAGATGCTTCCTCCGCAGATCGTCAACCGCGACAGCTTGACCGGAACCGGGCAGCTGCCGAAGT
TTGCCGAAGACGTATTCAAGCTTGAGGGTACTGATTACTTCCTGATTCCGACGGCGGAAGTGCCGGTGACGAACTATCAC
CGTGACGATATTTTGTCGGCGGAAGACCTGCCGAAGTATTTCGTCGCTTTCAGCGCCTGCTTCCGGTCTGAAGCCGGATC
GGCCGGCCGGGATACGCGCGGGTTGATCCGTCAGCATCAGTTCAACAAGATTGAACTCGTGAAGCTGACCCTGCCGGAAC
AATCGAATGACGAGCTCGAGAAATTGACTGCGGACGCGGAGAAGGTACTTCAGCTCCTGAAGCTGCCTTACCGGGTGCTG
TCGCTCTGTACGGGCGATATCGGCTTCTCGTCTTCGAAGACGTATGATCTGGAGGTATGGCTGCCTAACAGCAATACGTA
CCGTGAGATCTCGTCCTGCAGCAACTTCGAGGACTTCCAGGCCCGCCGCGCGAACATTCGCTTCCGCCGCGACGCGAAGG
CCAAGCCGGAATTCGTTCATACGCTGAACGGTTCGGGACTGGCGCTCGGCCGGACGGTTGCCGCGATCCTCGAGAATTAC
CAGCAGGAGGACGGCAGCGTCCTGATTCCTGAGGTACTTCGGCCTTATATGGGTGGCGTGACCAAGATCAGCAAAAAGTA
G

Protein sequence :
MLDVKLLRGDLDRVKQGLSNRGANLDDLDRFTSLDTNRRQLLQEVEQLKNRRNVVSQEVAQLKKAKENADHLIEEMKVVG
DRIKALDEEIRVLEADLDSILMSLPNLPQDSVPVGSSEEENVEIRRVGDVPAFGFEPKPHWEVAQALDILDFENAGKVTG
SRFVFYKGLGARLERALINFMMDLHADQHGYEEMLPPQIVNRDSLTGTGQLPKFAEDVFKLEGTDYFLIPTAEVPVTNYH
RDDILSAEDLPKYFVAFSACFRSEAGSAGRDTRGLIRQHQFNKIELVKLTLPEQSNDELEKLTADAEKVLQLLKLPYRVL
SLCTGDIGFSSSKTYDLEVWLPNSNTYREISSCSNFEDFQARRANIRFRRDAKAKPEFVHTLNGSGLALGRTVAAILENY
QQEDGSVLIPEVLRPYMGGVTKISKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 3e-127 61