Gene Information

Name : hfuC (SMB_G0807)
Accession : YP_004635454.1
Strain : Clostridium acetobutylicum DSM 1731
Genome accession: NC_015687
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 912765 - 913559 bp
Length : 795 bp
Strand : -
Note : -

DNA sequence : 
ATGACTAGGTTATATACTGACATGCTTAACGTCGCTTATGACAATAATTTGATTGTTAAAAATCTTAGTATAAAAATTCC
AGATAAAAAAATAACTACAATTATAGGTGCTAATGGTTGTGGAAAATCCACTTTACTTAAGGCGTTAACTCGTATAATTC
CAACTAAAACTGGAACAATTCTTTTGGATGGAAAAAATATTTTAAAAGAAAATACAAAAACCTTAGCTAAGAAAATAGCC
ATTCTACCACAAACCCCTGAGAGTACAGATGGAATAACTGTAGCCGAACTTGTTTCCTATGGACGTTATCCCTATCAAAA
AGGTTTTGGGAGGCTTTCAAAAAAAGATTATGAAGTTATTGACTGGGCACTGGAGGTAACTGGAACTAAGAATTACAAGT
TCAGACAACTAGATGCACTTTCAGGAGGACAACGTCAGAGGGCTTGGATAGCCATGGCATTAGCTCAAGAAACAGATATT
ATTTTTCTTGATGAACCTACAACTTATTTAGATATGGCACATCAACTAGAGGTATTAGAACTTCTGCAAAAACTTAATAA
AGAACAACATAGAACGGTTGTAATGGTATTACATGACTTAAATCAAGCAGCTAGATTCGCTGATTACATAATTGCCCTTA
AAAATGGAACTATAGTAAAAGCAGGAAAATGTGAAGAGGTAATAACTAAAAAAGTACTTATGAAAGTGTTTAATATCGAC
GCTGAAATTGGAATCGATCCTAGAACCACTAAACCAATATGTTTTACATACAACTTAATCAAGGAGATGAAGTAA

Protein sequence : 
MTRLYTDMLNVAYDNNLIVKNLSIKIPDKKITTIIGANGCGKSTLLKALTRIIPTKTGTILLDGKNILKENTKTLAKKIA
ILPQTPESTDGITVAELVSYGRYPYQKGFGRLSKKDYEVIDWALEVTGTKNYKFRQLDALSGGQRQRAWIAMALAQETDI
IFLDEPTTYLDMAHQLEVLELLQKLNKEQHRTVVMVLHDLNQAARFADYIIALKNGTIVKAGKCEEVITKKVLMKVFNID
AEIGIDPRTTKPICFTYNLIKEMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-52 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-52 49
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-51 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-45 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-45 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-45 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-45 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-46 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-48 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hfuC YP_004635454.1 ferrichrome ABC transporter ATP-binding protein BAC0164 Protein 1e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hfuC YP_004635454.1 ferrichrome ABC transporter ATP-binding protein VFG0925 Protein 1e-46 45
hfuC YP_004635454.1 ferrichrome ABC transporter ATP-binding protein VFG1042 Protein 1e-46 44