Gene Information

Name : SMB_G0608 (SMB_G0608)
Accession : YP_004635258.1
Strain : Clostridium acetobutylicum DSM 1731
Genome accession: NC_015687
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 686125 - 687000 bp
Length : 876 bp
Strand : +
Note : -

DNA sequence :
ATGGGTATGGATAGAAGTGATATGAATAAAAATCTCGCTCAAATGTTAAAGGGTGGAGTTATAATGGATGTTATTAATAA
GGAACAGGCCATAATTGCTGAAAAGGCAGGGGCATGTGCAGTAATGGCACTAGAAAGAGTACCAGCTGATATAAGAAAAC
AAGGTGGAGTAGCAAGAATGTCTGATCCTAAAATGATAAAAGAAATTAGGGAGTCTGTAACAATACCAGTTATGGCAAAG
GTTAGAATAGGGCATTTTGTTGAAGCCGAGATTCTTCAGTCTTTAGGAATAGATTTTATAGATGAAAGTGAGGTTCTAAC
TCCAGCTGATGATTCTTATCATATTGACAAAAAGGCCTTTAAGGTTCCATTTGTTTGTGGAGCAAGAAATCTTGGAGAAG
CACTTAGAAGAATTGGGGAAGGAGCTTCAATGATAAGAACAAAGGGTGAAGCAGGTACTGGAAATGTTGTTGAAGCTGTA
AAACATATGAGAACAGTTATGGATGAAATAAGGAGAGTTAAAAATGCAGCTAAGGAAGAAATTATGACAATTGCAAAAGA
ATTAGGAGCTCCATATGATCTCGTTCAATATGTTTGGATGAATGGAAGGCTTCCTGTAGTTAATTTTGCAGCAGGCGGTG
TTGCTACTCCAGCTGATGCTGCGCTTATGATTAGACTTGGTGCAGAAGGAGTATTTGTTGGCTCCGGTATATTTAAGTCT
GAAAATCCAGAAAAAAGAGCGAGAGCTATTGTAATGGCAGCAGCTTATTACGATGATCCTAAAGTGCTTGAAGAAGTGTC
GGAGGACCTTGGAGAGCCTATGTATGGACTTGAAATAAGTGACATAAAAGATAGATATGCAGAAAGAGGCTGGTAA

Protein sequence :
MGMDRSDMNKNLAQMLKGGVIMDVINKEQAIIAEKAGACAVMALERVPADIRKQGGVARMSDPKMIKEIRESVTIPVMAK
VRIGHFVEAEILQSLGIDFIDESEVLTPADDSYHIDKKAFKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAV
KHMRTVMDEIRRVKNAAKEEIMTIAKELGAPYDLVQYVWMNGRLPVVNFAAGGVATPADAALMIRLGAEGVFVGSGIFKS
ENPEKRARAIVMAAAYYDDPKVLEEVSEDLGEPMYGLEISDIKDRYAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-80 67
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 7e-80 67
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-79 67