Gene Information

Name : SMB_G3608 (SMB_G3608)
Accession : YP_004638221.1
Strain : Clostridium acetobutylicum DSM 1731
Genome accession: NC_015687
Putative virulence/resistance : Unknown
Product : topoisomerase B
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0550
EC number : -
Position : 3768257 - 3770386 bp
Length : 2130 bp
Strand : -
Note : -

DNA sequence :
ATGAGAAAAATATTGGTTATTTCTGAGAAACCATCAGTTGGTAGAGATATAGCTAATGTGCTTGGATGTAAAACTAGGGG
TGAAGGATGTCTTATTGGTGCTAAATATATTGTTACGTGGGCAGTAGGACACTTGGTAACTTTATGGGAGCCAGAAGAAT
ACAATGCAATTTATAAAAAATGGAGATTTGATACATTACCTATAATACCGGAAGTTATGAAAATAAAGCCTATTGATGGC
ACAAAGAAGCAGTTTAATATAATAAAAAAGCTCATGAATGATAACAGTGTGGAGTCCCTCATATGTGCAACAGATGCTGG
AAGAGAGGGAGAACTTATTTTTAGATATACATACGAAGCAGCAGAATGTAAAAAGCCATTTTCTAGACTTTGGATATCAA
GTATGACTGATGAAGCGATAAAGGAAGGATTTTCGACAATAAAACCAGGGACAGAATACGATAACCTTTATCACTCTGCA
AAGTGCAGATCAGAAGCAGATTGGCTTGTTGGAATGAATGCTAGTAGGGCGTATACCCTAAAGTATAATGTGCTTTTAAG
TGTTGGTAGAGTTCAAACTCCAACGCTTGCAATAATTGTTAAGAGGCAAAAAGAAATAGATAATTTTGAGCCAAAGGATT
ATTGGGAAGTGGTTTCTAAGTACGAGGGTTTTAATGGAACTTGGTTTGATAAAGAGACCAAGGAATCTAAGATAATGGAT
AAAAAGAAAGCAGATGATTTGGGGGCAAAAATCTTAGGACAAACAGGTAAGGTTATTAGTATTGAAAATAAGAAAAAGAA
GCAAGTTCCACCTCTCTTATATGATTTAACAGAACTTCAAAGAGACTGTAATAAGAAGTTTGGGTTTTCAGCACAAAAAA
CTTTAGACATAGTTCAAAGCTTGTACGAGAAAAGAAAGATGGTAACATATCCCAGAACCGACAGCAGATATTTAAGTCAC
GATATGGTGAACAAAATAAAAAAAACTATTGGACGATTAAATATTAATCCATACGACAAATATGTCGGAGAAATACTTAA
GTTATCTAAATTGCCAATGGGCAAAAGAATTATAGATGATTCCAAAGTAACAGACCATCATGCCATAATACCTACAGATG
TAAAACCAAATTTGAGTACGTTAACTAAGGATGAGCTTAAAGTCTATGATGCTATAGTTAGAAGATTTTTATGTGTTTTT
TATCCTAACTATGAGTACACTATAACCAAAATAGTTACAGAAGTTGTAGAAGAGAATTTTTTGACTCAGGGAAAAACTAT
TTTAAAGCTTGGATGGATGGAATTTTATAAGCATGATAAAAAAGAAAAAGATGATGAAAATAGTGAGCCAGATGAGCTTC
CTAAGTTAAAAAAGAATGAAAGTGTCCAGGTTAAAGATAGCGAAATTAAAGCTAAAAAGACCAAGGCACCAAGCTCTTAT
ACTGAAGCCTCGTTACTTTCTGCTATGGAAAATGCAGGTCGATTTGTGGAGGATGAACAGCTTAAAGAACAGCTTAAAGA
TGGAGGACTTGGTACACCAGCTACTAGAGCCTCAATAATAGAAAGATTAATACAGGTTGGATACATACAGCGTAAAGGAA
AAAGCCTACACCCTACTGATAAAGGAATGAAGCTAATAGAGATAGTACCATATGAATTGAGATCACCTGAAACTACTGGT
AAGTGGGAAAAAGGTTTGTCTTCAATTTCCAAAGGTAAAATGGCTTCAGAAAGGTTTATGCAAAGTATAAAAAGATATGT
TCAATATATAATACAAGAATCTGTGAAGGTAAATCGAAGTGTAGTTTTTCAGAACAATGATAGTAAGTTTCCTCAAAAGA
ACAAACAACTTCCTGAGGCTATAGGAGAGTGTCCATTTTGTAAAAGAGGAAAGGTATACGAGAATTCAAAAGCTTTCTAC
TGTAGTGAATGGAAAGGTGGATGTAAGTTTACAACCTGGAAGGATTCGCTTAAAAATTATGGAATACAGGTTGACAAAGA
TTTAGAAAAGAAATTACTTAAGGAAAGAGTATTGTATAATGTTTTTGGAATAGAACCTAAAAGTGGAGAGAAAACGGTGT
ATACATTAAAAATGAACAATTATGGTGCTGTTATAGCAAAGACACAATAA

Protein sequence :
MRKILVISEKPSVGRDIANVLGCKTRGEGCLIGAKYIVTWAVGHLVTLWEPEEYNAIYKKWRFDTLPIIPEVMKIKPIDG
TKKQFNIIKKLMNDNSVESLICATDAGREGELIFRYTYEAAECKKPFSRLWISSMTDEAIKEGFSTIKPGTEYDNLYHSA
KCRSEADWLVGMNASRAYTLKYNVLLSVGRVQTPTLAIIVKRQKEIDNFEPKDYWEVVSKYEGFNGTWFDKETKESKIMD
KKKADDLGAKILGQTGKVISIENKKKKQVPPLLYDLTELQRDCNKKFGFSAQKTLDIVQSLYEKRKMVTYPRTDSRYLSH
DMVNKIKKTIGRLNINPYDKYVGEILKLSKLPMGKRIIDDSKVTDHHAIIPTDVKPNLSTLTKDELKVYDAIVRRFLCVF
YPNYEYTITKIVTEVVEENFLTQGKTILKLGWMEFYKHDKKEKDDENSEPDELPKLKKNESVQVKDSEIKAKKTKAPSSY
TEASLLSAMENAGRFVEDEQLKEQLKDGGLGTPATRASIIERLIQVGYIQRKGKSLHPTDKGMKLIEIVPYELRSPETTG
KWEKGLSSISKGKMASERFMQSIKRYVQYIIQESVKVNRSVVFQNNDSKFPQKNKQLPEAIGECPFCKRGKVYENSKAFY
CSEWKGGCKFTTWKDSLKNYGIQVDKDLEKKLLKERVLYNVFGIEPKSGEKTVYTLKMNNYGAVIAKTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00720 YP_008394244.1 DNA topoisomerase III Not tested Not named Protein 1e-120 41