Gene Information

Name : srrA (SMB_G0329)
Accession : YP_004634982.1
Strain : Clostridium acetobutylicum DSM 1731
Genome accession: NC_015687
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 375642 - 376334 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAAATTTTAATTATTGAGGACGAGACTAGTATAGCTGAGCTTGAAAAAGATTATTTAGAACTTAGTAATTTCAA
AGTAGATATAGAGGTTTCAGGAAAGACAGGCTTAGAGGCGGCAAAGGAAAAAAACTATGAATTAATTATACTTGATTTAA
TGCTGCCTGAAATAGATGGTTTTGAGATATGTAAACAAATAAGAAAAATCAAGAACACTCCTATTCTTATGGTGTCGGCT
AAAAAGGAAGATATAGATAAAATAAGAGGTTTAGGTCTTGGTGCGGATGATTATATGACAAAGCCATTTAGTCCTAGTGA
GCTTGTGGCAAGAGTAAAGGCTCATATAAGTAGATATGAAAGGCTTGTTAATAGCAGTAATAAAAATTTAGATGATGAGA
TTGAAATTAGAGGTCTCAATATAAACAAAGCATCAAGAAAAGTATTCGTAAATGGAAAAGAGTCTCAATTTACAGCTAAG
GAATTTGATCTTTTGGTATTCTTAGCTCAAAATCCCGATAGAGTATTTAGTAAGGAAGAGTTATTTGATAAGATATGGGG
AATGGATTCATTTGGTGAAATAGCAACGGTTACAGTTCATATAAAGAAGATAAGAGAAAAAATTGAAAAGGATACTTCTA
ACCCTGAATATATTGAAACCGTGTGGGGTGCAGGATATAGGTTTAGAGGATAA

Protein sequence : 
MKKILIIEDETSIAELEKDYLELSNFKVDIEVSGKTGLEAAKEKNYELIILDLMLPEIDGFEICKQIRKIKNTPILMVSA
KKEDIDKIRGLGLGADDYMTKPFSPSELVARVKAHISRYERLVNSSNKNLDDEIEIRGLNINKASRKVFVNGKESQFTAK
EFDLLVFLAQNPDRVFSKEELFDKIWGMDSFGEIATVTVHIKKIREKIEKDTSNPEYIETVWGAGYRFRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
srrA YP_004634982.1 response regulator AM180355.1.gene1830. Protein 2e-46 47
srrA YP_004634982.1 response regulator HE999704.1.gene2815. Protein 1e-43 46
srrA YP_004634982.1 response regulator AE015929.1.gene1106. Protein 3e-35 45
srrA YP_004634982.1 response regulator AF130997.1.orf0.gene Protein 7e-43 45
srrA YP_004634982.1 response regulator NC_012469.1.7685629. Protein 7e-41 44
srrA YP_004634982.1 response regulator DQ212986.1.gene4.p01 Protein 1e-42 44
srrA YP_004634982.1 response regulator NC_003923.1003417.p0 Protein 1e-37 43
srrA YP_004634982.1 response regulator NC_013450.8614146.p0 Protein 1e-37 43
srrA YP_004634982.1 response regulator NC_002951.3238224.p0 Protein 1e-37 43
srrA YP_004634982.1 response regulator NC_007793.3914065.p0 Protein 1e-37 43
srrA YP_004634982.1 response regulator NC_002758.1121390.p0 Protein 1e-37 43
srrA YP_004634982.1 response regulator NC_010079.5776364.p0 Protein 1e-37 43
srrA YP_004634982.1 response regulator NC_002952.2859858.p0 Protein 1e-37 43
srrA YP_004634982.1 response regulator NC_007622.3794948.p0 Protein 1e-37 43
srrA YP_004634982.1 response regulator AE016830.1.gene1681. Protein 4e-43 43
srrA YP_004634982.1 response regulator NC_005054.2598277.p0 Protein 2e-43 43
srrA YP_004634982.1 response regulator AF155139.2.orf0.gene Protein 2e-47 43
srrA YP_004634982.1 response regulator NC_014475.1.orf0.gen Protein 2e-43 43
srrA YP_004634982.1 response regulator FJ349556.1.orf0.gene Protein 1e-42 42
srrA YP_004634982.1 response regulator EU250284.1.orf4.gene Protein 2e-40 42
srrA YP_004634982.1 response regulator AF162694.1.orf4.gene Protein 2e-42 42
srrA YP_004634982.1 response regulator NC_012469.1.7686381. Protein 1e-40 41
srrA YP_004634982.1 response regulator CP001581.1.gene280.p Protein 3e-37 41
srrA YP_004634982.1 response regulator NC_002952.2859905.p0 Protein 4e-41 41
srrA YP_004634982.1 response regulator NC_002951.3237708.p0 Protein 6e-41 41
srrA YP_004634982.1 response regulator NC_002758.1121668.p0 Protein 6e-41 41
srrA YP_004634982.1 response regulator NC_009641.5332272.p0 Protein 6e-41 41
srrA YP_004634982.1 response regulator NC_013450.8614421.p0 Protein 6e-41 41
srrA YP_004634982.1 response regulator NC_007793.3914279.p0 Protein 6e-41 41
srrA YP_004634982.1 response regulator NC_003923.1003749.p0 Protein 6e-41 41
srrA YP_004634982.1 response regulator NC_007622.3794472.p0 Protein 4e-41 41
srrA YP_004634982.1 response regulator NC_002745.1124361.p0 Protein 6e-41 41
srrA YP_004634982.1 response regulator NC_009782.5559369.p0 Protein 6e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
srrA YP_004634982.1 response regulator VFG1563 Protein 4e-39 41