|
Name : lysS (SMB_G3234) Accession : YP_004637850.1 Strain : Clostridium acetobutylicum DSM 1731 Genome accession: NC_015687 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3343545 - 3345092 bp Length : 1548 bp Strand : - Note : - DNA sequence : ATGTCAAATGATGAAAAGCAATTGACAAAGGAAGAAATGAAGGCAATTAAGCTTCAAGCAAAAGAAGAAGCTAAGATGAA CGATCTTTTAAAAGAGAGAAGGCAAAAACTTTCCGATGCACAAGAAAGAGGAAAGGATCCTTTTGATGTATATAAAGTTG AAAGAACACACACATCAAAACAAATCGTTGATAATTATGATGAGCTAGAGGATAAAATTGTAACTGTAGCTGGAAGACTT ATGTCGAAAAGAGTTCACGGTAAAGCAGGATTTTCCGACATATATGATAGATACGGCAAAATACAACTTTATCTTAAAAT TGACGATGTTGGAGAAGAGAAATTAAAAGAATTTAAAACCTTCGATATAGGAGATTTCGTTGTAATAACGGGAAAAGTTT TTAAAACTAAGACAGGGGAAATTACTTTACATGTAACTAAGCTTGAGCTTATTGCAAAATCATTAAAACCTCTTCCTGAA AAGTTTCATGGACTTAAAGATCCAGATTTAAAGTATAGACAAAGATATGTAGATCTAATTATAAATCAAGATGTAAGAGA AACATTCATGAAAAGAACAGCAATTATAAAGGCTGTAAGAGAGTTCTTGGATAATAAGGATTATTTAGAAGTAGAAACAC CTGTATTGTCAACTATTGCTAGTGGTGCATCTGCTAGGCCGTTTTCAACACACCATAATGCTCTTGATTTAGATATGCAT TTAAGAATAGCTACAGAGCTTTATTTAAAAAGATTAATAGTGGGTGGATTTGAAAAAGTTTACGAAATAGGTAAAGACTT TAGAAATGAAGGAATAGACGTAAGACATAATCCAGAGTTTACAATGATTGAATTATATGAAGCATATGCTGATTATAATG ATATGATGGAAATTACGGAGAATATGGTTGCATATGCATGTCAAAAAGTAAATGGAACTACAAAAATAACTTATGAAGGA ACGGAAATAGATTTAACACCTCCATGGAGAAGAGTAACTATGGTGGATATAGTTAAAGAACATTCTGGAATAGATTTTTC TACAGTAAAGACTGATGAGGAAGCAAGGGAAATTGCAAAAGAAAAGAAATTAGAGTTAAAGAAGGAATTAAAAGATTGTA CAAAGGGAGACATTCTAAACGCTTTATTTGAAGAATATGGTGAAAAGAAGCTAATACAGCCTACTTTTGTATGTGATTAT CCTGTAGAAATTTCACCTCTTACAAAGAAAAAGAGAGGAAATCCAGAGTACACCGAAAGATTTGAAGGATTTATATATGG TAGAGAAATATGTAATGCATATTCTGAGCTTAATGATCCTATAGTACAAAAGGATAGATTTATGCAGCAGCTTAAAGAAA GAGAATTGGGTGACGATGAAGCATATCAGATGGATGATGACTTCATAAATGCACTTGAAATAGGTATGCCTCCTACAGGG GGAATGGGAATGGGAATGGATAGATTAGTAATGTTCCTTACAGATTCACCATCTATAAGAGACGTAATATTATTCCCAAC AATGAAACCAACACCAAATAGAGATTAG Protein sequence : MSNDEKQLTKEEMKAIKLQAKEEAKMNDLLKERRQKLSDAQERGKDPFDVYKVERTHTSKQIVDNYDELEDKIVTVAGRL MSKRVHGKAGFSDIYDRYGKIQLYLKIDDVGEEKLKEFKTFDIGDFVVITGKVFKTKTGEITLHVTKLELIAKSLKPLPE KFHGLKDPDLKYRQRYVDLIINQDVRETFMKRTAIIKAVREFLDNKDYLEVETPVLSTIASGASARPFSTHHNALDLDMH LRIATELYLKRLIVGGFEKVYEIGKDFRNEGIDVRHNPEFTMIELYEAYADYNDMMEITENMVAYACQKVNGTTKITYEG TEIDLTPPWRRVTMVDIVKEHSGIDFSTVKTDEEAREIAKEKKLELKKELKDCTKGDILNALFEEYGEKKLIQPTFVCDY PVEISPLTKKKRGNPEYTERFEGFIYGREICNAYSELNDPIVQKDRFMQQLKERELGDDEAYQMDDDFINALEIGMPPTG GMGMGMDRLVMFLTDSPSIRDVILFPTMKPTPNRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-97 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004637850.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-97 | 47 |
