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Name : clpB (SMB_G3225) Accession : YP_004637842.1 Strain : Clostridium acetobutylicum DSM 1731 Genome accession: NC_015687 Putative virulence/resistance : Virulence Product : ABC transporter ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3329084 - 3331525 bp Length : 2442 bp Strand : - Note : - DNA sequence : ATGATGTTTGGTAGATTTTCCGACAGAGCTCAAAAAATGATTTATTATGCTCAGGAGGAAGCACAAAATTTCAAACATGG ATATGTTGGAACAGAGCATATACTTCTTGGCATTTTAAGAGATGAAAATGGGAAAGCTCAATCTCTCTTAGCCAATATGG GAGTTACAATAGAAAAGGTAAGAAGGCTTATAGAGGAGTATGAAGGTTTTGGGGATTCTGATCTTTACAAAGAAGAACCA CCTCTTACACCTAGGACTAAAAGGCTTTTGGAAATAAGTTTACTTGAAGCTAGAAATTTAAACCATAACTATATAAACCC AGAACATGTACTATTAGCACTTATAAGAGAAAGTGAAGGAGTAGCATTTACTATTCTTGGTAATCTTGGAGTAGATTTTG AAAGACTTAGAAAAGAAATTTTAGATAGTTTATCTGGTAGAGAAGAGAACACGGGAATAAAAACAAGTTTTAGTTCAAAT ACTTCAGTTACGCCAACATTGAATCAATACGGAACTGATTTAACACAAATGGCATTAGAAGGAAAGTTGGATCCTGTTAT TGGAAGAGATAATGAGACGCAAAGAATATTAGAAATACTTTGTAGGAGAACCAAAAACAATCCATGTCTTATAGGTGATC CAGGAGTTGGTAAAACGGCTATCGCAGAAGGCTTAGCTCAAAAGATAGTTGAGGGTAATATCCCAGAAATACTTAAAGAT AAAAGAGTTATTACTTTGGATGTATCATCGTTAGTTGCGGGGTCAAAATACAGAGGAGAATTCGAGGAAAGACTTAAGAA AGTTATGACAGAGATAAAGGCGGCTAAAAATGTAATACTTTTTATTGATGAGATTCATACTATTGTTGGTGCAGGTGGAG CTGAAGGTGCAATTGATGCATCAAATATTTTAAAACCTTCACTTGCTAGAGGAGAAATTCAGTGTATTGGTGCGACTACA ACAGAGGAATATAGAAGATATATAGAAAAAGATGCAGCTCTTGAAAGAAGATTTCAGCCAGTAGATGTAGGAGAGCCTAG TAAAGAAGAAGCAGTTCAAATACTTGAGGGACTTAGGGACAAATATGAAGCTCATCATGGAGTAAAAATCACAGATGATG CAATAGAGGCAGCAGTAAATCTTTCAACAAGATATATACAAGATAGATTTTTACCGGATAAGGCTATAGATTTAATAGAT GAGGCAGCTGCAAAAGTTAGAATTCAAAACCTTACAGCACCGCCAGATTTAAAAAATCAAGAAGAAGAGCTAGAAAAAAC TACACGAGAAAAATCAGATGCGATAAGACTTCAGGACTTTGAAAAAGCAGCTAAACTTAGAGATAAAGAAAAGAAGTTGA GAATTGCTATTGAAGAATTTAAAAAGAATTGGAAAAATACAAGTGATAACGAAAATTATATAGTAACACAAAAGCAGGTT GCTGCAGTTGTTGCTAAGTGGACCAGTATACCAGTTGAAAAACTCACAGAGAAAGAATCAGAAAGGTTACTTAAACTTGA AAGTATACTTCATAAAAGAGTTATAGGTCAAGAAGAAGCAGTTGAGTATGTTTCAAGAGCAGTACGAAGAGCTAGAGTTG GTCTTAAGGATCCTAAAAGACCAATAGGTTCATTTATATTCTTAGGGCCAACAGGCGTGGGAAAAACTGAATTATCAAAG GCATTAGCTGAAGCTATGTTTGGTGATGAGAATAATATTATAAGAATTGATATGTCAGAATACATGGAAAAACATACGGT ATCTCGTCTTGTGGGTTCTCCTCCAGGATATGTAGGGTATGATGAAGGCGGACAACTTACTGAGAAAGTAAGAAGAAAAC CTTATTCCGTAGTGCTTTTTGATGAAATAGAGAAAGCTCACCCAGATGTATTTAATATATTACTGCAAATTCTTGATGAC GGAAGACTTACCGATTCTAAAGGAAAGACTGTAAGTTTCACTAATACAATAATAATAATGACTTCAAATGTTGGAGCTTC TACAATAAGAAAACAAAAGACTTTAGGATTTGAAACGGCAAAAGATGCAGTAAGACAAGAATATGACAAAATGAAAGAAA ACATTATGGAGGAACTTAAAAATTCATTTAGACCTGAATTTTTAAATAGAATAGATGAAATAGTTGTGTTCCATAAGCTG GAGGAAAAAGATCTTAGACAAATAGTAAAACTTATGCTTGAATCAGTAAAAGGAAGATTAAAGGAACAAAATATAAAAAT TAATTTTACGGAAAAAGCGGAAGAAGTTCTAGCAGAAAAGGGATTTGATCCGACTTATGGGGCAAGGCCTTTAAGAAGAA CTATAATAAAAGCTGTTGAAGATAAACTTTCAGAAGAGATATTAAAGGGAACAATAAGTAAAAATGATAATATTTCCGTA GATGTGGATAAAGATAAAGAGTTACTATTTACAAAAGCTTAA Protein sequence : MMFGRFSDRAQKMIYYAQEEAQNFKHGYVGTEHILLGILRDENGKAQSLLANMGVTIEKVRRLIEEYEGFGDSDLYKEEP PLTPRTKRLLEISLLEARNLNHNYINPEHVLLALIRESEGVAFTILGNLGVDFERLRKEILDSLSGREENTGIKTSFSSN TSVTPTLNQYGTDLTQMALEGKLDPVIGRDNETQRILEILCRRTKNNPCLIGDPGVGKTAIAEGLAQKIVEGNIPEILKD KRVITLDVSSLVAGSKYRGEFEERLKKVMTEIKAAKNVILFIDEIHTIVGAGGAEGAIDASNILKPSLARGEIQCIGATT TEEYRRYIEKDAALERRFQPVDVGEPSKEEAVQILEGLRDKYEAHHGVKITDDAIEAAVNLSTRYIQDRFLPDKAIDLID EAAAKVRIQNLTAPPDLKNQEEELEKTTREKSDAIRLQDFEKAAKLRDKEKKLRIAIEEFKKNWKNTSDNENYIVTQKQV AAVVAKWTSIPVEKLTEKESERLLKLESILHKRVIGQEEAVEYVSRAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSK ALAEAMFGDENNIIRIDMSEYMEKHTVSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNILLQILDD GRLTDSKGKTVSFTNTIIIMTSNVGASTIRKQKTLGFETAKDAVRQEYDKMKENIMEELKNSFRPEFLNRIDEIVVFHKL EEKDLRQIVKLMLESVKGRLKEQNIKINFTEKAEEVLAEKGFDPTYGARPLRRTIIKAVEDKLSEEILKGTISKNDNISV DVDKDKELLFTKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 55 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004637842.1 | ABC transporter ATPase | VFG0079 | Protein | 0.0 | 60 |
| clpB | YP_004637842.1 | ABC transporter ATPase | VFG0080 | Protein | 9e-154 | 51 |
