Gene Information

Name : ywqD (SMB_G3076)
Accession : YP_004637694.1
Strain : Clostridium acetobutylicum DSM 1731
Genome accession: NC_015687
Putative virulence/resistance : Virulence
Product : CPSC/ subfamily ATPase
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 3191435 - 3192133 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGTTGATTGTTAAGGATAATCCTAAATCTCCAGTAGCAGAATCTTATAGAACCTTAAGAAGTAACATTCAGTTTTCAAG
TTTCGATGAAGAAATTAGAGTTATACTGGTTACAAGTTCAGGGCCAGGTGAAGGAAAATCAACTACGGCAGCTAATTTAG
CACTTGCCATGGCTGAAACAGGAAATCAAGTTTTAATTGTTGACTGCGATTTAAGAAAACCAAGCATACACAAAAAATTT
AAATTATCTAATAGTTCTGGTTTATCAAACATAATAGCGGGACAAGCTAAGTTTGAAGATTCGGCTCATTATTTTAATAA
GAAACTTTGTGTTTTAACCTCTGGTAAAATACCACCTAATCCTGCAGAAATGCTTGCATCACATAAAATGAAAGAATTCT
TAAATGAATCAAAAGGAGTATTTAAATATATAATACTTGATACTCCTCCTATAATAGCAGTAACGGACCCTCAAATTCTT
TCTACTATGGTAGATGGTGTGATTTTAGTTGTAAGTTCTGGGGTGGCTGAAATAGAAGCAGCTAAAAGAGCTAAAGAACT
TTTAGAAAATGTAAATGCCAACATACTTGGAACAGTTCTTAACAAGGTAAAAGTAGGTAGTAGAGGTTATTACAGTTATT
ATGGCAACGAAGGTAAAAGGGGAAAGAGGCGTAAAAGAAAAAGGAAACTGTTTAAGTAG

Protein sequence : 
MLIVKDNPKSPVAESYRTLRSNIQFSSFDEEIRVILVTSSGPGEGKSTTAANLALAMAETGNQVLIVDCDLRKPSIHKKF
KLSNSSGLSNIIAGQAKFEDSAHYFNKKLCVLTSGKIPPNPAEMLASHKMKEFLNESKGVFKYIILDTPPIIAVTDPQIL
STMVDGVILVVSSGVAEIEAAKRAKELLENVNANILGTVLNKVKVGSRGYYSYYGNEGKRGKRRKRKRKLFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-37 41
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ywqD YP_004637694.1 CPSC/ subfamily ATPase VFG1298 Protein 7e-37 41