Gene Information

Name : SMB_G2099 (SMB_G2099)
Accession : YP_004636731.1
Strain : Clostridium acetobutylicum DSM 1731
Genome accession: NC_015687
Putative virulence/resistance : Unknown
Product : XerD family integrase/recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2171628 - 2172506 bp
Length : 879 bp
Strand : -
Note : -

DNA sequence :
ATGGATAATTTAATTGAACAATACTTTGCTGAAATAAGAAAGAAAAATCTTAGTTTAAATACAATAGATGCATATAGACG
TGATATAAAGAAATTTCATGAATTTTTAGATGAAAAAGGTGAAAAGCTTCGAGAGGTTGATGTTATTACGATAATGTCGT
ATGTGCAGTATTTGCAAAAAAATGGACGGGCTAATAGTTCTATTGTAAGAAATATAGTATCCATAAGAAATTTTTTCAAA
TACTTGGAGATAAAAGGCATAATGGATGATAATCCTGTAACACAATATGAGATGCCAAAGATAAGAAGGAATTTTCCTGA
TATTCTTACAATAGAAGAGGTTGAAAAATTGCTAATGGGTCCTGATGGAAATACTGATAAGGGTATAAGGGATAAAGCAA
TGCTAGAAATAATGTATGCAACAGGAATGAAGGTTACGGAACTGTTGAATTTAACTATATATGATATAAATTTAAAACTA
TCTTACATAAAATGTCGCGGTATAAAAAATAAGGAAAGAATAATTCCAATGGGGTCATATGCAGTTAAGTGTCTTGAAAT
ATATTTAAAGGTAAGAACAAAGTTAAATGTTCAAAATATTGATTATCTTTTTTTTAATCTACAAGGTGATAAAATGACTC
GTCAAGGTTTTTGGAAGATAATTAAGCAGTATGCACAAGAATCTGGTATAAAAAAGAAGATTAATGCATATACTTTAAGG
CATTCATTTGCGGTTCATTTACTTCAAAATGGAGCGGATATAAAGACTATACAAGAGCTTTTAGGACATAGTGATATGGC
TACTACTCAAATTTATTCTGGTATGTATAGAAAGACAAGAATAGCTGAAGTTTACAAGAAAACTCATCCTAGAGCTTAA

Protein sequence :
MDNLIEQYFAEIRKKNLSLNTIDAYRRDIKKFHEFLDEKGEKLREVDVITIMSYVQYLQKNGRANSSIVRNIVSIRNFFK
YLEIKGIMDDNPVTQYEMPKIRRNFPDILTIEEVEKLLMGPDGNTDKGIRDKAMLEIMYATGMKVTELLNLTIYDINLKL
SYIKCRGIKNKERIIPMGSYAVKCLEIYLKVRTKLNVQNIDYLFFNLQGDKMTRQGFWKIIKQYAQESGIKKKINAYTLR
HSFAVHLLQNGADIKTIQELLGHSDMATTQIYSGMYRKTRIAEVYKKTHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-47 45
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-47 45