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Name : pdp (SMB_G1571) Accession : YP_004636213.1 Strain : Clostridium acetobutylicum DSM 1731 Genome accession: NC_015687 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : - Position : 1691571 - 1692872 bp Length : 1302 bp Strand : + Note : - DNA sequence : ATGAGAATGGTAGATATAATCTCAAAAAAAAGAGATGGAGGAGAACTTACAAAAGATGAAATTTATTTTTTTGTAAATGG ATATACGAATGGAACGATTCCTGATTATCAGGTAAGTGCACTTACAATGGCTATTTATTTTAAGGACATGACTGAAAGGG AAAGAGCAGATTTAACAATGGCCATGGTGAAATCTGGAGAAACTGTTGACCTATCGCAAATTGAAGGGATAAAAGTAGAT AAGCACTCGACAGGCGGAGTTGGAGATACTACAACACTTGTACTGGCACCTCTTGTTGCAGCTTTAGGAGTACCAGTTGC TAAAATGTCAGGAAGAGGGTTAGGTCATACAGGAGGAACTATTGATAAACTAGAGTCTATTAGTGGCTTTAATGTAGCAC TTACAAAGGAAAAGTTCGTAGAATTAGTTAATCGTAATAAGGTTGCAGTTGTTGGTCAAACAGGCAATTTAACTCCAGCA GATAAAAAGCTATATGCACTTCGTGATGTAACTGGAAGTGTAGAATCAATTCCACTAATTGCTAGTTCTATTATGAGTAA AAAGATTGCAGCAGGAGCAGATGCAATAGTATTGGATGTAAAGACTGGTGCAGGTGCATTTATGAAGACGGAGAAGGATG CGGAAGAACTGGCACATGCTATGGTTAAAATAGGGAATAACGTTGGTAGAAAAACTATGGCAGTAATATCAGATATGTCT CAGCCTTTGGGTTTTGCCGTAGGGAATGCACTTGAGGTAAAGGAAGCTATTGATACATTAAAGGGGCAAGGACCAGAGGA TTTAACAGAACTTGTTCTAACTCTTGGAAGTCAAATGGTTATGCTAGCTAAGAAGGCAAATACATTGGAAGAAGCAAAAG AAAAGCTTGTAGAGGTAATAAAAAGCGGTAAAGCTTTAGAAAAATTTAAGCTGTTTCTTGAAAGCCAAGGGGGAGATTCA TCAATTGTAGATAATCCTGAAAAGTTACCGCAGTCAAAATATAAGATTGATGTTTTAGCAAAAGAAAGCGGCTTTGTTTC CAATATTGTAGCGGATGAAATTGGAATTGCAGCAATGCTTTTAGGTGCAGGAAGAGCTACAAAGGAAGATACAGTGGATT TAGCTGTTGGGCTTGTACTTAACAAAAAAGTAGGCGATAAAGTGCAAAAAGATGAACCAATTGTAACTATTTATTCAAAT AGAGAAGATGTAGAAGAGGTAAAAAACAAAATTTATAAGAGTATAGCAATTTCAAAAAAAGCTGTAAGACCAGTGCTTAT TCATAAAATTATTACAGAATAA Protein sequence : MRMVDIISKKRDGGELTKDEIYFFVNGYTNGTIPDYQVSALTMAIYFKDMTERERADLTMAMVKSGETVDLSQIEGIKVD KHSTGGVGDTTTLVLAPLVAALGVPVAKMSGRGLGHTGGTIDKLESISGFNVALTKEKFVELVNRNKVAVVGQTGNLTPA DKKLYALRDVTGSVESIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTEKDAEELAHAMVKIGNNVGRKTMAVISDMS QPLGFAVGNALEVKEAIDTLKGQGPEDLTELVLTLGSQMVMLAKKANTLEEAKEKLVEVIKSGKALEKFKLFLESQGGDS SIVDNPEKLPQSKYKIDVLAKESGFVSNIVADEIGIAAMLLGAGRATKEDTVDLAVGLVLNKKVGDKVQKDEPIVTIYSN REDVEEVKNKIYKSIAISKKAVRPVLIHKIITE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 9e-73 | 46 |
