Gene Information

Name : pyk (SMB_G1054)
Accession : YP_004635701.1
Strain : Clostridium acetobutylicum DSM 1731
Genome accession: NC_015687
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 1185400 - 1186818 bp
Length : 1419 bp
Strand : -
Note : -

DNA sequence :
GTGCAAAAAACAAAAATGATTTTTACAATAGGGCCCTCTAGTGATTCAGAGGAGAAATTAAAAGAATTAATGAATGCTGG
AATGAATGCTGCAAGGTTAAATTTTTCACATGGCACTCATGAAGATCACAAAGAAAAAATAGATATTATAAAAAAACTTA
GAAAAGAACTGAACAAAAATGTTGCAATTGTAGTTGACATCAAAGGACCAAAAATTAGAACTCATAATTTTGAAAATGAC
AAAGCTGAAATAAAAAAAGGTCAAACCTTCACAGTAATGTGTGGAAGCGAAATTTTGGGAAATTCAGAGAAATGCTCCGT
TTCTTATGATGATCTTTATAAAGATGTAAAAAAAGGTGGATTACTCCTTGTCGATGATGGTCTTTTAGAATTTGAAATAA
CTGATGTACAAGACAAAAACATTATTTGTAAGGCAAAAAATAATGGTATTATTTCAAATCATAAAGGTGTAAATGTACCT
GGTGTTTCTATAGGTCTTCCTGCTGTAACTGAAAAAGATGTATTAGATTTAAAATTTGCATGTAAAATGCAAGCTGATTT
AGTAGCTGCTTCTTTTATAAGAAAAGCAGAAGATGTATCTGTCGTTAGAAAGGTTCTTAAAGAAAATGGTGGAGAAGATA
TAAGAGTTATCTCTAAGATAGAAACTCAAGAAGGTGTTGATAACATCGATAAGATTCTCGAACTATCTGATGGAATCATG
GTAGCAAGAGGAGATATGGGTGTTGAAATTCCAATAGAGGATGTTCCTTCAATACAGAAAATGATAATAAGAAAATGTAA
TGATGCAGGCAAAATAGTTATAACAGCTACTCAAATGCTTGATTCAATGATAAGAAACCCAAGACCTACAAGAGCTGAGG
CATCAGATGTTGCCAATGCAATATATGACGGAACAGATGCTATAATGCTAAGTGGAGAAAGTGCAAGTGGTTTATATCCA
ATTGAAGCTGCTGAAACTATGGCAAAGATAGCACAAAAAACAGAATCTCAAATAGACTATACTAAAGCTCTTAATGAAAG
AAAAGGTGAAATTATAACAAAAATTTCAGACGCTATAAGTCTTGCTGCATGCTCAACTGCTGCTGAACTTAAAGCTGCTG
CTATAATAACAGCTACTCAAAGCGGTATAACTGCAAGAATGGTATCTAAATTCAGACCAACTTGCCCTATAATAGCTGTT
ACACCTCATGATGATGTTGCAAGAAGACTTGCTCTAAACTTTGGTATAACACCTATTACATCTGAAAAAGTTGTTTCAAC
AGATGAACTTATATCTGTTTCAATAAAAAGAGCACTTAACGAGAATTTAATTAAAAAAGGTGACTTAGTTGTTGTAGTTG
CAGGTGTTCCTGTAGGCGAATCTGGAACTACTAATATGTTAAAAATTCAATACACATAA

Protein sequence :
MQKTKMIFTIGPSSDSEEKLKELMNAGMNAARLNFSHGTHEDHKEKIDIIKKLRKELNKNVAIVVDIKGPKIRTHNFEND
KAEIKKGQTFTVMCGSEILGNSEKCSVSYDDLYKDVKKGGLLLVDDGLLEFEITDVQDKNIICKAKNNGIISNHKGVNVP
GVSIGLPAVTEKDVLDLKFACKMQADLVAASFIRKAEDVSVVRKVLKENGGEDIRVISKIETQEGVDNIDKILELSDGIM
VARGDMGVEIPIEDVPSIQKMIIRKCNDAGKIVITATQMLDSMIRNPRPTRAEASDVANAIYDGTDAIMLSGESASGLYP
IEAAETMAKIAQKTESQIDYTKALNERKGEIITKISDAISLAACSTAAELKAAAIITATQSGITARMVSKFRPTCPIIAV
TPHDDVARRLALNFGITPITSEKVVSTDELISVSIKRALNENLIKKGDLVVVVAGVPVGESGTTNMLKIQYT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 5e-79 50
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 5e-79 50
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-78 50
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 7e-79 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_004635701.1 pyruvate kinase VFG0479 Protein 2e-79 50